prot_H-elongata_contig81085.15763.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81085.15763.1
Unique Nameprot_H-elongata_contig81085.15763.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: D7FMB0_ECTSI (Similar to Solute carrier family 25 (Mitochondrial carrier citrate transporter), member 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMB0_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 4.480e-26
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 0
Query:    1 AQEAGVTYSKVARDTISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDGGDKYGLGSVR 68
            +++  VTY  V R+T+   GFSGFYRGLSSMVYFAAPKAAIRFG+FEF SGLLSTP+GGDKYGLG+ +
Sbjct:   43 SKDPNVTYGSVMRNTVKNTGFSGFYRGLSSMVYFAAPKAAIRFGAFEFCSGLLSTPEGGDKYGLGAAK 110          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: W7TKG4_9STRA (Solute carrier family 25 (Mitochondrial carrier citrate transporter) member 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKG4_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 6.890e-21
Identity = 43/63 (68.25%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    6 VTYSKVARDTISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDGGDKYGLGSVR 68
            V+  +V  +T+++RGF GFYRGLSSM+YFAAPKAAIRF SFEFFSGLL+  +GGDKYGLG  +
Sbjct:   46 VSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAK 108          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: A0A7S1VIB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIB4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.070e-14
Identity = 39/63 (61.90%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    6 VTYSKVARDTISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDGGDKYGLGSVR 68
            VT   V   T ++ G  GFYRGL SMVYFAAPKAAIRF +FE  SGLLS P+G D YGLG  +
Sbjct:   45 VTAGNVISTTFAEAGPVGFYRGLPSMVYFAAPKAAIRFAAFETCSGLLSGPNGEDIYGLGKAK 107          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: A0A0M0J9A5_9EUKA (Tricarboxylate transport mitochondrial n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9A5_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 3.250e-11
Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   10 KVARDTISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDGGDKYG 63
            KV RDT+   G  GFYRGLSSMVYFA PKAA+RF +FE  S +L T DG   +G
Sbjct:   51 KVVRDTLKTHGPLGFYRGLSSMVYFATPKAALRFSAFEAASDMLKTSDGKPMFG 104          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: A0A6U3C197_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3C197_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 1.030e-10
Identity = 33/63 (52.38%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    6 VTYSKVARDTISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDGGDKYGLGSVR 68
            ++   V   T+   G  G YRGLSSM+YFA PKAAIRFG FE  S +L   DG D YGLG  +
Sbjct:   47 LSMGNVVSRTLKSAGPLGMYRGLSSMLYFATPKAAIRFGGFETCSSMLVDKDGRDIYGLGKAK 109          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: A0A7S2I9W3_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I9W3_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 1.500e-10
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   11 VARDTISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDGGDKYG 63
            V R+T++  G  GFYRGLSSMVYFA PKAAIRF SFE  S  L+T DG   +G
Sbjct:   50 VVRNTMANEGPIGFYRGLSSMVYFATPKAAIRFSSFEAASAALTTSDGKPMFG 102          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: A0A7S0END0_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0END0_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 5.510e-9
Identity = 29/57 (50.88%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    7 TYSKVARDTISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDGGDKYG 63
            T   V ++T+  RG  G Y+GL SMVYFA PKAAIRF  FE  S  +  PDG   +G
Sbjct:   47 TAMDVVKNTVRTRGVLGLYKGLDSMVYFATPKAAIRFSGFEAASNAMRAPDGSPMFG 103          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: UPI0013042DBF (putative tricarboxylate transport protein, mitochondrial n=1 Tax=Nomia melanderi TaxID=2448451 RepID=UPI0013042DBF)

HSP 1 Score: 54.7 bits (130), Expect = 6.560e-7
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 0
Query:   15 TISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDG 58
            TI  RGF GFYRGLS ++Y + PK+A+RFGSFE   G+L   +G
Sbjct:   94 TIQNRGFFGFYRGLSVLLYGSIPKSAVRFGSFETMKGILVDENG 137          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: UPI001602D79B (tricarboxylate transport protein, mitochondrial-like isoform X3 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001602D79B)

HSP 1 Score: 54.3 bits (129), Expect = 9.030e-7
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   15 TISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDG 58
            T+   G  G YRGLSS+VY + PKAA+RFG+FEFFS ++    G
Sbjct:   99 TVRDHGVRGLYRGLSSLVYGSIPKAAVRFGAFEFFSNMMRNERG 142          
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Match: A0A6P4YZP3_BRABE (tricarboxylate transport protein, mitochondrial-like isoform X1 n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YZP3_BRABE)

HSP 1 Score: 54.3 bits (129), Expect = 9.070e-7
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   15 TISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSTPDG 58
            T+   G  G YRGLSS+VY + PKAA+RFG+FEFFS ++    G
Sbjct:   97 TVRDHGVRGLYRGLSSLVYGSIPKAAVRFGAFEFFSNMMRNERG 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81085.15763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMB0_ECTSI4.480e-2672.06Similar to Solute carrier family 25 (Mitochondrial... [more]
W7TKG4_9STRA6.890e-2168.25Solute carrier family 25 (Mitochondrial carrier ci... [more]
A0A7S1VIB4_9STRA2.070e-1461.90Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A0M0J9A5_9EUKA3.250e-1161.11Tricarboxylate transport mitochondrial n=1 Tax=Chr... [more]
A0A6U3C197_9EUKA1.030e-1052.38Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2I9W3_9EUKA1.500e-1062.26Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S0END0_9EUKA5.510e-950.88Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
UPI0013042DBF6.560e-756.82putative tricarboxylate transport protein, mitocho... [more]
UPI001602D79B9.030e-754.55tricarboxylate transport protein, mitochondrial-li... [more]
A0A6P4YZP3_BRABE9.070e-754.55tricarboxylate transport protein, mitochondrial-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 8..54
e-value: 4.6E-7
score: 29.7
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 1..52
score: 9.598
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 1..67
e-value: 3.4E-8
score: 34.5
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 8..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81085contigH-elongata_contig81085:179..406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81085.15763.1mRNA_H-elongata_contig81085.15763.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81085 179..406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81085.15763.1 ID=prot_H-elongata_contig81085.15763.1|Name=mRNA_H-elongata_contig81085.15763.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
AQEAGVTYSKVARDTISQRGFSGFYRGLSSMVYFAAPKAAIRFGSFEFFS
GLLSTPDGGDKYGLGSVREGRGRGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf