prot_H-elongata_contig80982.15758.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80982.15758.1
Unique Nameprot_H-elongata_contig80982.15758.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: A0A6H5KBT2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT2_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-15
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    2 YSQVDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAHCRML 91
            Y+Q   F YLG  ++  GD+  EI  R+  AW C  +Y R ++D P      K+R L+AE +E +LY C+TW+  SG +  LR  H R+L
Sbjct:  351 YAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLRAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLL 440          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: A0A6H5K2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J8_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.290e-14
Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 MYSQVDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAH 87
            ++ Q   F YLG  I   G +  EI  R   A  CF + S+A+YD P   +  KVR L+AEV+E +LY CVTW L   ++ KLR AH
Sbjct:  121 VFKQKKDFVYLGGKICQDGSIEGEINHRVQRAHACFRRNSQAMYDRPGGPLRLKVRLLQAEVVETLLYGCVTWNLKPAEYRKLRSAH 207          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: A0A6H5JG33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG33_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.160e-13
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    2 YSQVDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAHCRML 91
            Y+Q   F YLG  ++   D+  EI  R+  AW C  +Y R ++D P      K+R L+AE +E +LY   TW+  SG++ +LR  H R+L
Sbjct:  241 YAQTTEFRYLGGLVNEHCDLTREINYRSRGAWACSRRYGRELFDRPKAPFRRKIRLLQAEAMEALLYGYTTWSALSGNYQRLRSIHHRLL 330          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: A0A5C6MLY4_9TELE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6MLY4_9TELE)

HSP 1 Score: 58.5 bits (140), Expect = 5.000e-8
Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    5 VDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAHCRML 91
            V+TF YLGSTIS    +  E+ +R G A + F K +  V+DN  +    KV+  +A V+  +LY   TWTL S    +L   + R L
Sbjct:  139 VNTFTYLGSTISDNLSLDVELSKRIGKAASTFRKLTERVWDNGKLTTHTKVQVYRACVISTLLYGSETWTLYSHQERRLNSFYLRCL 225          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: A0A5C6N528_9TELE (Reverse transcriptase domain-containing protein n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6N528_9TELE)

HSP 1 Score: 58.2 bits (139), Expect = 6.440e-8
Identity = 32/87 (36.78%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    5 VDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAHCRML 91
            ++TF YLGSTI+    +  E+ RR G A + F K +  V+DN  +    KV+  +A V+  +LY   TWTL S    +L   + R L
Sbjct:   63 INTFTYLGSTITENLSLDVELSRRIGKAASTFRKLTERVWDNGKLTTHTKVQVYRACVISTLLYGSETWTLYSHQERRLNSFYLRCL 149          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: UPI00077A9CA8 (uncharacterized protein LOC107358129 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A9CA8)

HSP 1 Score: 57.0 bits (136), Expect = 8.200e-8
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0
Query:    5 VDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAHCRML 91
            V+TF YLGSTIS    +  EI +R   A + F + S  V++   I++ +K++  +A VL  +LY   TWT+       L   H R L
Sbjct:   47 VETFTYLGSTISRTATIDAEINKRISKASSAFGRLSEKVWERREISLENKLKVYRAVVLTTLLYGSETWTVYRRHEKLLNHFHLRCL 133          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: A0A6H5JIS7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS7_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.790e-7
Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 0
Query:    2 YSQVDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTD---KVRFLKAEVLEVMLYDCVTWTLS 76
            Y Q D F YLG TI + G    EI  R+  AW C+ + +  V         D   K+R L+AEV+E +LY+C +W+L+
Sbjct:  158 YKQTDQFVYLGHTIFADGKADREITSRSCRAWKCYRRNAGTVLRCTTWRRADLQLKIRLLQAEVVETLLYECSSWSLT 235          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: A0A0N4XTM7_NIPBR (Reverse transcriptase domain-containing protein n=1 Tax=Nippostrongylus brasiliensis TaxID=27835 RepID=A0A0N4XTM7_NIPBR)

HSP 1 Score: 56.2 bits (134), Expect = 2.990e-7
Identity = 30/87 (34.48%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    5 VDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAHCRML 91
            V+TFAYLGSTI++ GDV  E++ R   A   F +  R ++ +  I++  K+R   + V+   +Y   TW +S+ +  +L   HC+ L
Sbjct:   95 VNTFAYLGSTITTDGDVTVEVRSRIAKATAVFQRL-RPLWTSSSISIDVKLRLYSSIVVPTAIYASETWKMSTSNVRRLNAFHCKCL 180          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: A0A0N4Y0P1_NIPBR (Uncharacterized protein n=1 Tax=Nippostrongylus brasiliensis TaxID=27835 RepID=A0A0N4Y0P1_NIPBR)

HSP 1 Score: 55.5 bits (132), Expect = 3.710e-7
Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    5 VDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAHCRML 91
            V+TFAYLGSTI++ GDV  E++ R   A   F +  R  + +  I++  K+R   + V+   +Y   TW +S+ +  +L   HC+ L
Sbjct:   22 VNTFAYLGSTITTDGDVTVEVRSRIAKAMAVFQRL-RPPWTSSSISIDVKLRLYSSIVVPTAIYASETWKMSTSNVRRLNAFHCKCL 107          
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Match: UPI001FB8472B (uncharacterized protein LOC125044886 n=1 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB8472B)

HSP 1 Score: 55.5 bits (132), Expect = 4.810e-7
Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    5 VDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIAVTDKVRFLKAEVLEVMLYDCVTWT 74
            VD+F YLGST+S   ++G E+  R   A + F +    V++   +++T K++  +A VL  +LY C TWT
Sbjct:  175 VDSFTYLGSTLSRAVNIGAEVINRIAKASSAFGRLRENVWERTGLSLTTKLKVYRAVVLTTLLYACETWT 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80982.15758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBT2_9PHAE1.020e-1540.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K2J8_9PHAE1.290e-1443.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG33_9PHAE1.160e-1337.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5C6MLY4_9TELE5.000e-837.93Reverse transcriptase domain-containing protein (F... [more]
A0A5C6N528_9TELE6.440e-836.78Reverse transcriptase domain-containing protein n=... [more]
UPI00077A9CA88.200e-835.63uncharacterized protein LOC107358129 n=1 Tax=Acrop... [more]
A0A6H5JIS7_9PHAE1.790e-738.46Reverse transcriptase domain-containing protein n=... [more]
A0A0N4XTM7_NIPBR2.990e-734.48Reverse transcriptase domain-containing protein n=... [more]
A0A0N4Y0P1_NIPBR3.710e-734.48Uncharacterized protein n=1 Tax=Nippostrongylus br... [more]
UPI001FB8472B4.810e-737.14uncharacterized protein LOC125044886 n=1 Tax=Penae... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 3..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80982contigH-elongata_contig80982:10..282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80982.15758.1mRNA_H-elongata_contig80982.15758.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80982 4..282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80982.15758.1 ID=prot_H-elongata_contig80982.15758.1|Name=mRNA_H-elongata_contig80982.15758.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
MYSQVDTFAYLGSTISSVGDVGPEIKRRAGYAWNCFLKYSRAVYDNPYIA
VTDKVRFLKAEVLEVMLYDCVTWTLSSGDFDKLREAHCRML
back to top