prot_H-elongata_contig80977.15756.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80977.15756.1
Unique Nameprot_H-elongata_contig80977.15756.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length623
Homology
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BLAST of mRNA_H-elongata_contig80977.15756.1 vs. uniprot
Match: D7G6G4_ECTSI (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G4_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.890e-21
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0 
Query:  517 REDALTARLLMAEELLAERERQLESTNISMAEMMQNGEHGGGDVGGERGRASAERGMTAVRERHRTEVSRLEGVLEAERKKAKAAAEAMKGWERRAEEFEEKDKML 622
            REDALTARLL+AEELL ERERQLESTN++MAE+MQNG   G    G  G A+A   +  +R +H  EVSRLE ++EAER+K KAAA+A++ WE +AEEFEEKDKML
Sbjct:  705 REDALTARLLVAEELLLERERQLESTNLAMAEIMQNGSKAGSAGDGSDGGAAA---VADLRGQHAQEVSRLEDLVEAERRKGKAAADAVRSWETKAEEFEEKDKML 807
[Close]
BLAST of mRNA_H-elongata_contig80977.15756.1 vs. uniprot
Match: A0A6H5K2Z4_9PHAE (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z4_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.660e-19
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 0 
Query:  506 DLTAALVASREREDALTARLLMAEELLAERERQLESTNISMAEMMQNGEHGGGDVGGERGRASAERGMTAVRERHRTEVSRLEGVLEAERKKAKAAAEAMKGWERRAEEFEEKDKML 622
            DL A      EREDAL ARLL+AEELL ERERQLESTN++MAE+MQNG   G                  +R+RH  EVSRLEG++EAE++K KAAA+A++ WE +AEEFEEKDKML
Sbjct:  684 DLAAXXXXXXEREDALMARLLVAEELLLERERQLESTNLAMAEIMQNG---GKAXXXXXXXXXXXXXXXDLRDRHAREVSRLEGLIEAEKRKGKAAADAVRSWETKAEEFEEKDKML 797
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80977.15756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6G4_ECTSI1.890e-2164.15TMF_TATA_bd domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5K2Z4_9PHAE1.660e-1958.12TMF_TATA_bd domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 577..618
NoneNo IPR availableCOILSCoilCoilcoord: 532..552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80977contigH-elongata_contig80977:344..2527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80977.15756.1mRNA_H-elongata_contig80977.15756.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80977 344..2527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80977.15756.1 ID=prot_H-elongata_contig80977.15756.1|Name=mRNA_H-elongata_contig80977.15756.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=623bp
DQLLPSSPPLSNSTDPDRNTPMSGFFGNPVEENAVGEVVSPAVRRVSRDE
RFTRREKSGAEGAQESGGRVRLSLLEAGGVPGLEEAFTGKSGRSAKQSIA
GEGWGDIALDSDDDLDILDTTASAETSEGVEKGTVDSGFPEAGGPKGRQS
QAQPPPEGLPEEQERDRNNDHDISAAKPEIGASEPVLPWAVRSSVANDGD
GGIDDEEEEDRGKPDGATEAVPTPSLRIAEDDEEEYAADAGVVTATAASG
PPDEVRAFSSPVVRSQQHGQDQEGEKDKGCPADGDWPEKVDPWEKGTAAW
LRDQQKSSKETRQEDAGREKRCPPSEGEEIPETMAEAPGGEVCQEEEGRS
RNAKGGIMPSAPVPAPPGASTKAEEEEEEEKAGTPMSTIEPNTLGSDQSP
SGDGIVCVAAAAPPVGLVDVIGAVAASTATNGSDRMSEVEARRRRAAAAA
AERRRLASGSPASVTEGRESCGAAPPGGERIEANLARPEGDSGENAQRRS
AAETRDLTAALVASREREDALTARLLMAEELLAERERQLESTNISMAEMM
QNGEHGGGDVGGERGRASAERGMTAVRERHRTEVSRLEGVLEAERKKAKA
AAEAMKGWERRAEEFEEKDKMLQ
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