prot_H-elongata_contig80859.15743.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80859.15743.1
Unique Nameprot_H-elongata_contig80859.15743.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length484
Homology
BLAST of mRNA_H-elongata_contig80859.15743.1 vs. uniprot
Match: D7G385_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G385_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.420e-67
Identity = 217/510 (42.55%), Postives = 266/510 (52.16%), Query Frame = 0
Query:    2 FPSDRRTCPPGIVLLLSVRSGDARRTTSLLRA-------------GVRPDATRDARGNTALHIAAAYGHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARASSGQTPLRWALSLGRAET----ATALLQLGADPDAPDRLGACCLHAVAGFRSEGCSGVRSAFAHTSPFPAWSPAAMAELLLSFGASVN--QASGQA------RASFTPSLSEATTPEAGNGP-----ARDEGAG--DGVSRVSCAGETPLHIAARESSVWVAKLLLQSGSDPNAKTSAEEGGFSPLHSAAAPGCDNSRLVVRVLLEAGADIDVVAADGVTTPLRLACQNATVGCVEELLHWGAHDLSLAPPPRPPPGSHHVIALPSVGAHVEDGHPLSGVEEVAAYSSSSAAYDIDVSPFVPPPLAAVVGSRVPLSAKDVAEENYIRELLRKAPFERAWRRRGWLVMLYARAVLA 479
            FPS  R C  G+VLLLSVRSGDA +T +LLR               + PDATRDARG+T+LH+A+ +  +                                                           XXXXXXXXXXXXXXXXXXXXXX                          A ALL+ GADPDAPDR GACCLH VA  +SE      SAFA T    +  P  MA+LLLS GA+ N  +A+G+A      R   + +L+  +  ++G+G         +G G   G    S A E+PLH+AARES+V VA+LLL  G+DPNAKT   EGG SPLH      C  SR +VR+LL AGADI VV+ADG+T+PL+LAC NA VGCV+ELL WGA DLS  P   PP      + L S+ +  E   P          S +SAA  I+V     P L  +VGSRVP S +D A+   I  +L +AP +RAWRRRGWLVMLYAR   A
Sbjct:    7 FPSCSRACSAGVVLLLSVRSGDAAKTRALLRRLPSSENSSDDRVPPLHPDATRDARGHTSLHVASIHDRSEIARLLIAAGASTESVVTSGANEGLTPLRLAAERGHLLTVRALLEAGADTTAEDVVDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEALLEAGADPDAPDRRGACCLHTVAALKSE--EDGSSAFAGTGEGSSL-PGDMAQLLLSAGANPNLGRAAGRAGRIHPGRTPSSTALTLGSINQSGSGDNSSAAGAHDGGGLWSGSGSESSASESPLHVAARESNVRVAELLLLHGADPNAKTPMREGGMSPLH------CAASRPIVRMLLAAGADISVVSADGLTSPLKLACLNAAVGCVKELLSWGADDLSCVPRSTPPS----TLLLSSLPSISETAPPC---PSSVPLSEASAAQRINV-----PRLGGLVGSRVPASVRDAADCEEIVRMLCQAPADRAWRRRGWLVMLYARTTAA 495          
BLAST of mRNA_H-elongata_contig80859.15743.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.450e-7
Identity = 69/211 (32.70%), Postives = 95/211 (45.02%), Query Frame = 0
Query:  274 LHIAARESSVWVAKLLLQSGSDPNAKTSAEEGGFSPLHSAAAPGCDNSRLVVRVLLEAGADIDVVAADG---VTTPLRLACQNATVGCVEELLHWGAHDLSLAPPPRPPPGSHHVIALPSVGAHVEDGHPLSGVEEVAAYSSSSAAYDIDVSPFVPPPLAAVVGSRVPLSAKDVAEENY-IRELLRKAPFERAWRRRGWLVMLYARAVLAR 480
            +++A +   V V K  L+ G D +++      G++ LH AA    DN    V VLLEAGAD DV +  G     TPL  A ++ +   +  LL  GA       P +P           S+  H+       GV EV        A +  V+     P  A V  R+ +   D  EE      LL +AP +RAWRRRGW+VML AR+   R
Sbjct:  171 INVATQLGHVGVIKAFLEHGVDASSQA-CPASGWTALHQAA---LDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGAD------PNKPDDNG-------SMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTP--AEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETER 362          
BLAST of mRNA_H-elongata_contig80859.15743.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 3.420e-7
Identity = 55/190 (28.95%), Postives = 85/190 (44.74%), Query Frame = 0
Query:  287 KLLLQSGSDPNAKTSAEEGGFSPLHSAAAPGCDNSRLV----VRVLLEAGADIDVVAADGVT-TPLRLACQNATVGCVEELLHWGAHDLSLAPPPRPPPGSHHVIALPSVGAHVEDGHPLSGVEEVAAYSSSSAAYDIDVSPFVPPPLAAVVGSRVPLSAKDVAEENYIRELLRKAPFERAWRRRGWLVM 471
            ++LL++G+D +AKT+ +    +PLH A      N R+     +R LLE GA+++  A D    TPL +AC  ++V  VE LLHWGA +                  L  +      G  +   EE                   PP +    G          A+++ IR++L +AP +R+W RR WLV+
Sbjct:   42 RVLLEAGADVDAKTTGDGNCATPLHYAV-----NRRIAPIGAIRALLEGGANVN--ARDVFDQTPLHVACARSSVNGVEFLLHWGADE-----------------KLTDLDGETPAGAIVDSEEET------------------PPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80859.15743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G385_ECTSI1.420e-6742.55Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
D7FSI6_ECTSI2.450e-732.70Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5K6K9_9PHAE3.420e-728.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 45..60
score: 48.15
coord: 285..299
score: 39.04
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 305..337
e-value: 1.5
score: 17.9
coord: 145..174
e-value: 0.15
score: 21.2
coord: 342..372
e-value: 1800.0
score: 3.0
coord: 269..298
e-value: 0.0077
score: 25.4
coord: 192..228
e-value: 3900.0
score: 0.6
coord: 44..73
e-value: 4.0E-5
score: 33.0
coord: 78..107
e-value: 2.5
score: 17.1
coord: 112..141
e-value: 2.3E-4
score: 30.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 45..71
e-value: 7.9E-5
score: 22.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 112..144
score: 12.636
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 269..301
score: 13.411
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 305..340
score: 12.182
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 44..76
score: 13.01
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 78..110
score: 11.461
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 145..177
score: 11.461
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 112..238
e-value: 1.9E-22
score: 81.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 256..373
e-value: 5.9E-23
score: 83.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..111
e-value: 1.3E-21
score: 78.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 15..367
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 95..175
e-value: 2.3E-11
score: 44.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 15..367
score: 62.977
NoneNo IPR availablePFAMPF13637Ank_4coord: 272..314
e-value: 3.5E-5
score: 24.2
NoneNo IPR availablePANTHERPTHR24118FAMILY NOT NAMEDcoord: 80..319
coord: 306..370
coord: 15..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..484
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80859contigH-elongata_contig80859:1011..2525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80859.15743.1mRNA_H-elongata_contig80859.15743.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80859 1011..2525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80859.15743.1 ID=prot_H-elongata_contig80859.15743.1|Name=mRNA_H-elongata_contig80859.15743.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=484bp
MFPSDRRTCPPGIVLLLSVRSGDARRTTSLLRAGVRPDATRDARGNTALH
IAAAYGHAEIARTLIEAGASTETLTPGDRFTPLRLAAERGHLCNVQVLLN
ASADMDAQDQLDRATPLHAAAEAGHTSVVRELARRGANLEARASSGQTPL
RWALSLGRAETATALLQLGADPDAPDRLGACCLHAVAGFRSEGCSGVRSA
FAHTSPFPAWSPAAMAELLLSFGASVNQASGQARASFTPSLSEATTPEAG
NGPARDEGAGDGVSRVSCAGETPLHIAARESSVWVAKLLLQSGSDPNAKT
SAEEGGFSPLHSAAAPGCDNSRLVVRVLLEAGADIDVVAADGVTTPLRLA
CQNATVGCVEELLHWGAHDLSLAPPPRPPPGSHHVIALPSVGAHVEDGHP
LSGVEEVAAYSSSSAAYDIDVSPFVPPPLAAVVGSRVPLSAKDVAEENYI
RELLRKAPFERAWRRRGWLVMLYARAVLARRDSS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom