prot_H-elongata_contig80786.15737.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80786.15737.1
Unique Nameprot_H-elongata_contig80786.15737.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length164
Homology
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: D7G5U2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5U2_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 6.440e-87
Identity = 139/164 (84.76%), Postives = 145/164 (88.41%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFASVVGVSSAEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDYLKSSDVDQSDATP 164
            QYVLIRLV TAVAL LQLGHLYTEGDFDPKRGYLWITVVTC SQSWALYVLVLFYR  AT+KELVHIHPMGKFLAIKTIVFFSWWQGILIE L+GQG+FASVVGVSS EG   S+ D SEHVAQ IQDLLICLEMLVAAVFFFYAFPLSDYLKS    Q+  +P
Sbjct:  233 QYVLIRLVSTAVALALQLGHLYTEGDFDPKRGYLWITVVTCCSQSWALYVLVLFYR--ATYKELVHIHPMGKFLAIKTIVFFSWWQGILIEILEGQGYFASVVGVSSGEGGDLSEHDPSEHVAQGIQDLLICLEMLVAAVFFFYAFPLSDYLKSPHDSQASPSP 394          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: A0A835YQ95_9STRA (Organic solute transporter Ostalpha-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ95_9STRA)

HSP 1 Score: 152 bits (383), Expect = 3.240e-40
Identity = 80/157 (50.96%), Postives = 106/157 (67.52%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFASVVGVSSAEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDYLKSSDV 157
            Q+++IR+  T VAL +QL     +G    + G++ +T V C SQ WALYVL+LFY    THKE+ HIHPMGKFLAIK +V  SWWQG+L+E L+ +GH A V       G+ P+      H+AQ IQDLLIC EM+VAAV FF+AFPL+D++  + V
Sbjct:  286 QFLIIRVASTLVALYVQLVQ-RLQGHGASQAGHMVVTAVVCCSQMWALYVLLLFYS--VTHKEMSHIHPMGKFLAIKAVVALSWWQGVLVEFLEHKGHIADV-------GQYPAN-----HIAQGIQDLLICAEMMVAAVAFFFAFPLNDFVHHTPV 427          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: A0A7S2R496_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R496_9STRA)

HSP 1 Score: 148 bits (374), Expect = 7.000e-40
Identity = 75/156 (48.08%), Postives = 104/156 (66.67%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFASVVGVSSAEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDYLKSSD 156
            Q+V++R   T  A+VLQ   LY EG +D  RG+LW+++V   SQ+WALYVL LFY   ATHK+LVHIHP GKFL IK +VFFS+WQG+ I  L  QG       +   + + P      E VA+ I+DLL+C+EM VAA+ + + FP+SD++ ++D
Sbjct:  229 QFVVVRFCTTVAAVVLQANGLYGEGVYDTHRGFLWLSLVNSASQAWALYVLFLFYH--ATHKDLVHIHPFGKFLCIKAVVFFSYWQGVAIGYLLHQG------SIQELDMQPP------ETVARAIKDLLVCMEMFVAAIAYQFMFPVSDFIGAND 370          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: A0A7S2XZN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN0_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.740e-38
Identity = 70/152 (46.05%), Postives = 98/152 (64.47%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFASVVGVSSAEGRIPSKD-DASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDY 151
            QYV+ R+V T +A+ ++   LY EG++ P  G+ W+T+  CLSQ+WALYVLVLFY   ATHK+L  IHP  KFL IK +VFF WWQG+ +E +  +G              I   D D+ E +++ IQD+LIC+EM  A++ F  AFP+SD+
Sbjct:    6 QYVVCRVVTTVMAVGMEPFGLYREGEYHPATGFFWVTLANCLSQTWALYVLVLFYH--ATHKDLGDIHPFAKFLCIKAVVFFCWWQGLGVELMIHRG-------------LIDKMDVDSVEALSRGIQDMLICMEMFFASIAFLNAFPVSDF 142          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: K8Z680_NANGC (Transmembrane protein 184c n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z680_NANGC)

HSP 1 Score: 141 bits (355), Expect = 1.270e-37
Identity = 69/152 (45.39%), Postives = 100/152 (65.79%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFASVVGVSSAEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDYL 152
            QY+ +RL    +   L+   LY EG++  +RG+ W+TV  C+SQ+WALY+L+LFY   ATHKEL+ I+P GKF ++K++VF SWWQ +LI  +  QG            G + S   ++E VA+ IQDLLIC EM +AA+ F +AFP+SD++
Sbjct:  174 QYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYH--ATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTI----------GELDSH--SAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFV 311          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: W7U0S2_9STRA (Signal recognition particle-docking protein FtsY n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0S2_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.700e-36
Identity = 69/152 (45.39%), Postives = 100/152 (65.79%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFASVVGVSSAEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDYL 152
            QY+ +RL    +   L+   LY EG++  +RG+ W+TV  C+SQ+WALY+L+LFY   ATHKEL+ I+P GKF ++K++VF SWWQ +LI  +  QG            G + S   ++E VA+ IQDLLIC EM +AA+ F +AFP+SD++
Sbjct:  769 QYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYH--ATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTI----------GELDSH--SAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFV 906          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: A0A4D9DA43_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA43_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.580e-35
Identity = 68/152 (44.74%), Postives = 99/152 (65.13%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFASVVGVSSAEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDYL 152
            QY+ +RL        L+   +Y EG++  +RG+ W+TV  C+SQ+WALY+L+LFY   ATHKEL+ I+P GKF ++K++VF SWWQ +LI  +  QG            G + S   ++E VA+ IQDLLIC EM +AA+ F +AFP+SD++
Sbjct:  227 QYLGVRLATLVFTFALESLDMYAEGEYTVRRGFFWMTVANCISQTWALYILILFYH--ATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTI----------GELDSH--SAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFV 364          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: B8BWD0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWD0_THAPS)

HSP 1 Score: 130 bits (326), Expect = 4.700e-34
Identity = 70/154 (45.45%), Postives = 99/154 (64.29%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQG---HFASVVGVSSAEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDY 151
            QYVL+++V + + + L++  LY EGDF P+ GYL+I ++T LSQ WALY L  FY   AT  EL  I P+GKFL++K +VFF+WWQ + I  L   G   H+A+V      +GR    +  +E VA+ +QD LIC+EM VAA+   + FP +DY
Sbjct:  142 QYVLLKVVSSIIVMFLEIYGLYKEGDFTPRGGYLYICIITNLSQCWALYCLAFFYY--ATKNELGPIRPVGKFLSVKAVVFFTWWQSLGISILFQMGMIPHYAAV-----DDGR----EWTAEAVAKGLQDYLICIEMFVAAIVHTFVFPHTDY 284          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: A0A7S2WKX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WKX9_9STRA)

HSP 1 Score: 126 bits (317), Expect = 5.330e-33
Identity = 65/163 (39.88%), Postives = 96/163 (58.90%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFASVVGVSSAEGRI---------PSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDYLKS 154
            QYVL++  C      L++  LY EG+F  K GYL+I ++T +SQ WALY ++ FY   AT  EL  I P+GKFL++K IVFF+WWQ + I  L   G F +    +S+E  +         P    + E VA+ +QD LIC+EM +AA+   + FP ++Y+ +
Sbjct:    8 QYVLLKFACAIFVFALEMNGLYKEGNFTYKGGYLYICIITNISQCWALYCMIFFYY--ATKNELGPIRPVGKFLSVKAIVFFTWWQSLFISILFEMGMFHNYSISASSETTLNIGDILEESPGNMWSPEDVAKGLQDYLICIEMFIAAIVHQFVFPHTEYINT 168          
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Match: A0A7S4JUS5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JUS5_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.390e-33
Identity = 72/176 (40.91%), Postives = 95/176 (53.98%), Query Frame = 0
Query:    1 QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYVLVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECL---------QGQGHFASVVGVSS--------------AEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSDYLK 153
            QYV+++  C+ +A++L+L  LY EGDF  K GY +I  VT LSQ WALY LV FY   AT  EL  I P+GKFL++K +VFF+WWQ + I  L            GH     GV                + GR        E VA+ +QD LIC+EM V A+   + FP +DYL+
Sbjct:   27 QYVVLKFFCSFLAMILELCGLYHEGDFSYKYGYFYICFVTNLSQCWALYCLVFFYN--ATKNELGPIRPVGKFLSVKALVFFTWWQSVGISILFQMGMIPGYDAPGHLGPSGGVEEXXXXXXXXXXXXXMSGGRDGRHHMTPEEVAKGLQDYLICIEMFVGAIVHVFVFPHTDYLQ 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80786.15737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5U2_ECTSI6.440e-8784.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQ95_9STRA3.240e-4050.96Organic solute transporter Ostalpha-domain-contain... [more]
A0A7S2R496_9STRA7.000e-4048.08Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2XZN0_9STRA1.740e-3846.05Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
K8Z680_NANGC1.270e-3745.39Transmembrane protein 184c n=1 Tax=Nannochloropsis... [more]
W7U0S2_9STRA8.700e-3645.39Signal recognition particle-docking protein FtsY n... [more]
A0A4D9DA43_9STRA1.580e-3544.74Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
B8BWD0_THAPS4.700e-3445.45Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2WKX9_9STRA5.330e-3339.88Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S4JUS5_9STRA6.390e-3340.91Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005178Organic solute transporter subunit alpha/Transmembrane protein 184PFAMPF03619Solute_trans_acoord: 1..151
e-value: 3.3E-42
score: 144.8
IPR005178Organic solute transporter subunit alpha/Transmembrane protein 184PANTHERPTHR23423ORGANIC SOLUTE TRANSPORTER-RELATEDcoord: 1..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..32
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 2..23
NoneNo IPR availableTMHMMTMhelixcoord: 129..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80786contigH-elongata_contig80786:567..2798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80786.15737.1mRNA_H-elongata_contig80786.15737.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80786 567..2798 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80786.15737.1 ID=prot_H-elongata_contig80786.15737.1|Name=mRNA_H-elongata_contig80786.15737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
QYVLIRLVCTAVALVLQLGHLYTEGDFDPKRGYLWITVVTCLSQSWALYV
LVLFYRRVATHKELVHIHPMGKFLAIKTIVFFSWWQGILIECLQGQGHFA
SVVGVSSAEGRIPSKDDASEHVAQCIQDLLICLEMLVAAVFFFYAFPLSD
YLKSSDVDQSDATP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005178Ostalpha/TMEM184C