prot_H-elongata_contig80783.15736.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A8J6CJZ5_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CJZ5_9ROSI) HSP 1 Score: 57.4 bits (137), Expect = 2.670e-8 Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGYVTYDWSGVPFVMKLKKSIYGLRQSP 50
+DV N D+ +EV++Q PG+V YD +G PFV +LKK++YGLRQ+P
Sbjct: 1148 VDVNNAFLNGDLDNEVFMQQPPGFVQYDSAGQPFVCRLKKALYGLRQAP 1196
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A6P4PAH9_GOSAR (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Gossypium arboreum TaxID=29729 RepID=A0A6P4PAH9_GOSAR) HSP 1 Score: 55.1 bits (131), Expect = 1.740e-7 Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGYVTYDWSGVPFVMKLKKSIYGLRQSP 50
+DV N D+ +V++Q PG+V YD +G PFV +LKK++YGLRQ+P
Sbjct: 30 VDVNNAFLNGDLDTKVFMQQPPGFVQYDSTGQPFVCRLKKALYGLRQAP 78
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A6H5JVC8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC8_9PHAE) HSP 1 Score: 52.8 bits (125), Expect = 8.490e-7 Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGY-VTYDWSGVPFVMKLKKSIYGLRQSP 50
+DV +++++EVYV+ A GY +T + +G+P VMKLKKS+YGL+QSP
Sbjct: 102 MDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSP 151
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 52.8 bits (125), Expect = 1.140e-6 Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGY-VTYDWSGVPFVMKLKKSIYGLRQSP 50
+DV +++++EVYV+ A GY +T + +G+P VMKLKKS+YGL+QSP
Sbjct: 998 MDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSP 1047
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A6H5KFG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG1_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 1.870e-6 Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGY-VTYDWSGVPFVMKLKKSIYGLRQSP 50
+DV +++++EVYV+ A GY +T + +G+P VMKLKKS+YGL+QSP
Sbjct: 14 MDVVTEFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSP 63
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 2.130e-6 Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGY-VTYDWSGVPFVMKLKKSIYGLRQSP 50
+DV + +++EVYV+ A GY +T + +G+P VMKLKKS+YGL+QSP
Sbjct: 434 MDVVTAFLQSKVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSP 483
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A8J5YEZ0_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YEZ0_9ROSI) HSP 1 Score: 51.2 bits (121), Expect = 4.010e-6 Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGYVTYDWSGVPFVMKLKKSIYGLRQS 49
+DV N D+ EV++Q P +V YD +G PFV +LKK++YGLRQ+
Sbjct: 906 VDVNNAFLNGDLDTEVFMQQPPDFVQYDSTGQPFVCRLKKALYGLRQA 953
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A8J6D0Y5_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D0Y5_9ROSI) HSP 1 Score: 50.8 bits (120), Expect = 5.390e-6 Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 0
Query: 10 NADIKDEVYVQMAPGYVTYDWSGVPFVMKLKKSIYGLRQSP 50
N D+ EV +Q + GYV Y G PFV +LKK++YGLRQ+P
Sbjct: 61 NGDLDSEVLMQQSSGYVQYGSDGKPFVCRLKKALYGLRQAP 101
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE) HSP 1 Score: 50.8 bits (120), Expect = 5.470e-6 Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGYVTYDW-SGVPFVMKLKKSIYGLRQSP 50
+DV R ++++++VYV+ A GY T D +G+P VMKLKKS+ GL+QSP
Sbjct: 14 MDVVTAFRQSNVEEDVYVRQAKGYETTDEVTGLPLVMKLKKSLNGLKQSP 63
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Match: A0A6A2Z3V1_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Z3V1_HIBSY) HSP 1 Score: 50.1 bits (118), Expect = 1.030e-5 Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 2 LDVQVVSRNADIKDEVYVQMAPGYVTYDWSGVPFVMKLKKSIYGLRQSP 50
+D+ N D+ +EVY+Q PG+ + G PFV KL+K++YGLRQ+P
Sbjct: 1198 VDINNAFLNGDLLEEVYMQQPPGFEKVNEHGKPFVCKLQKALYGLRQAP 1246 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80783.15736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig80783.15736.1 ID=prot_H-elongata_contig80783.15736.1|Name=mRNA_H-elongata_contig80783.15736.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bpback to top |