prot_H-elongata_contig80762.15731.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80762.15731.1
Unique Nameprot_H-elongata_contig80762.15731.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: D8LDR4_ECTSI (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR4_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.900e-36
Identity = 73/113 (64.60%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    1 IGRLHLEHSVDVQCSARLKIPAGDDDGGAVARSAEA-----VDAAEAFLACTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 108
            IG+LH E+ VDVQC A L +                     VDA  AFL C RTDR DGL+TTVVCDT G+ALGLVYSN+ SIRAS+ESGRGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:  216 IGKLHHEYGVDVQCPATLSLEGXXXXXXXXXXXXXXXXXXXVDAVSAFLTCLRTDRPDGLMTTVVCDTMGIALGLVYSNSTSIRASIESGRGVYWSRSRGGLWRKGDTSGAWQ 328          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A6H5L2R7_9PHAE (PRA-CH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R7_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.440e-33
Identity = 74/131 (56.49%), Postives = 82/131 (62.60%), Query Frame = 0
Query:    1 IGRLHLEHSVDVQCSARLKIPAGDDDGGAVARSAEA---VDAAEAFLACTRTDRTDGLITTVVCDTAGVALGL--------------------VYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 108
            IG+LH E+ VDVQC A L +                   VDA  AFLAC RTDR DGL+TTVVCDT G+ALGL                    VYSN++SIRAS+ESGRGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:  154 IGKLHHEYGVDVQCPATLSLEGXXXXXXXXXXXXXXXXXVDAVSAFLACLRTDRPDGLMTTVVCDTMGIALGLQPLPPPPNSCTPNLRTPPSKVYSNSSSIRASIESGRGVYWSRSRGGLWRKGDTSGAWQ 284          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A835ZKL0_9STRA (PRA-CH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKL0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.400e-27
Identity = 64/119 (53.78%), Postives = 72/119 (60.50%), Query Frame = 0
Query:    1 IGRLHLEHSVDVQCSARLK-IPAGDDDGGAVARSAEAV---------DAAEAFLACTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQV 109
            IG+LH E  +DV     ++ +P   D                     D A A  AC R+DR DGLI TVVCD  GVALGLVYSNA S+ AS+  GRGVYWSRSRGGLWRKGDTSGAWQ 
Sbjct:  195 IGQLHKEFGIDVVAPCHVESVPDPSDTATPXXXXXXXXXXXXXXXXQDVAAAVFACLRSDRPDGLIPTVVCDECGVALGLVYSNAQSVAASIACGRGVYWSRSRGGLWRKGDTSGAWQA 313          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A7S2V4U4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4U4_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.330e-25
Identity = 61/109 (55.96%), Postives = 72/109 (66.06%), Query Frame = 0
Query:    1 IGRLH-LEHSVDVQCSARLKIPAGDDDGGAVARSAEAVDAAEAFLACTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 108
            +G +H ++  VD  C A +         G V+        A+AF+AC RTDR DGL TTVV D  GVALGLVYSNA S++AS  + RGVYWSRSRGGLWRKGDTSGA Q
Sbjct:  185 VGAIHRMKPQVDAACPAAILPEDAPPQPGKVSL-------ADAFMACCRTDRPDGLFTTVVVDECGVALGLVYSNALSVKASFAAKRGVYWSRSRGGLWRKGDTSGAVQ 286          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A7S2WIY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIY7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.080e-25
Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 0
Query:   37 VDAAEAFLACTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 108
            +D  + F+AC RTDR+DGL TTVV D  GVALGLVYSN  SIRA++   RGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:  203 LDLVDCFVACLRTDRSDGLYTTVVADQCGVALGLVYSNPESIRAAVCCSRGVYWSRSRGGLWRKGDTSGAWQ 274          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A2R5GVC6_9STRA (Histidine biosynthesis trifunctional protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVC6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.460e-24
Identity = 65/111 (58.56%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    1 IGRLHLEHSVDVQCS---ARLKIPAGDDDGGAVARSAEAVDAAEAFLACTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 108
            IG+LH  HS D   S   A + +P G D    V  S        A ++C RTDRTDGL  TVV D  GVALGLVYS++ASI ASLE GRGVYWSRSR  LWRKGDTSGA+Q
Sbjct:  512 IGKLHSLHSSDYPVSVSHASVSLP-GKDAAVDVPDSDAVFCLGRALVSCLRTDRTDGLYATVVADEFGVALGLVYSSSASILASLECGRGVYWSRSRQSLWRKGDTSGAFQ 621          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A7S0E3V5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E3V5_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 3.720e-23
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 0
Query:   46 CTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQV 109
            C RTDRTDGL+TTVV +  GVALGLVYSN AS+ A++E+GRGVY SRS+GGLWRKGDTSGA+Q 
Sbjct:   19 CARTDRTDGLMTTVVAEEGGVALGLVYSNPASLAAAVEAGRGVYHSRSKGGLWRKGDTSGAYQT 82          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A0G4HM72_9ALVE (PRA-CH domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HM72_9ALVE)

HSP 1 Score: 101 bits (252), Expect = 5.430e-23
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 0
Query:   43 FLACTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 108
            F A  ++DR DGL TTVVCD +GVALGLVYSN  S+ A++E  RGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:  256 FAATLKSDRPDGLFTTVVCDESGVALGLVYSNVQSLHAAVECMRGVYWSRSRGGLWRKGDTSGAWQ 321          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A225X605_9STRA (Phosphoribosyl-ATP diphosphatase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X605_9STRA)

HSP 1 Score: 100 bits (250), Expect = 9.990e-23
Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 0
Query:   25 DDGGAVARSAEAVDAAEAFLACTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSG 105
            +D  AV      VDAA AF+ C RTDR DGL TTVV D AGVALGLVYS+A SI A++ SGRGVY+SRSRGGLW+KG++SG
Sbjct:  220 EDVAAVVEGEAVVDAALAFVKCLRTDRPDGLFTTVVADEAGVALGLVYSSAESIIAAVSSGRGVYYSRSRGGLWKKGESSG 300          
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Match: A0A2P4XN02_9STRA (Phosphoribosyl-ATP diphosphatase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XN02_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.400e-22
Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0
Query:   19 KIPAGDDDGGAVARSAEAVDAAEAFLACTRTDRTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRKGDTSG 105
            ++ A  +DG AV      VDAA+AF+ C RTDR DGL TTVV D AGVALGLVYS++ SI A++ SGRGVY+SRSRGGLW+KG++SG
Sbjct:  226 QVEAVTEDGEAV------VDAAQAFVKCLRTDRPDGLFTTVVADEAGVALGLVYSSSESIIAAVSSGRGVYYSRSRGGLWKKGESSG 306          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80762.15731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR4_ECTSI1.900e-3664.60Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ectocarp... [more]
A0A6H5L2R7_9PHAE4.440e-3356.49PRA-CH domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZKL0_9STRA6.400e-2753.78PRA-CH domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S2V4U4_9STRA2.330e-2555.96Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2WIY7_9STRA4.080e-2573.61Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R5GVC6_9STRA1.460e-2458.56Histidine biosynthesis trifunctional protein n=1 T... [more]
A0A7S0E3V5_9EUKA3.720e-2375.00Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A0G4HM72_9ALVE5.430e-2374.24PRA-CH domain-containing protein n=1 Tax=Chromera ... [more]
A0A225X605_9STRA9.990e-2366.67Phosphoribosyl-ATP diphosphatase n=1 Tax=Phytophth... [more]
A0A2P4XN02_9STRA1.400e-2263.22Phosphoribosyl-ATP diphosphatase n=1 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002496Phosphoribosyl-AMP cyclohydrolase domainPFAMPF01502PRA-CHcoord: 70..108
e-value: 4.3E-12
score: 45.7
IPR038019Phosphoribosyl-AMP cyclohydrolase domain superfamilyGENE3D3.10.20.400coord: 33..109
e-value: 1.4E-15
score: 58.8
IPR038019Phosphoribosyl-AMP cyclohydrolase domain superfamilySUPERFAMILY141734HisI-likecoord: 44..108
NoneNo IPR availablePANTHERPTHR42945FAMILY NOT NAMEDcoord: 35..108
NoneNo IPR availablePANTHERPTHR42945:SF1HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN HISIE, CHLOROPLASTICcoord: 35..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80762contigH-elongata_contig80762:1601..2364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80762.15731.1mRNA_H-elongata_contig80762.15731.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80762 1601..2364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80762.15731.1 ID=prot_H-elongata_contig80762.15731.1|Name=mRNA_H-elongata_contig80762.15731.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
IGRLHLEHSVDVQCSARLKIPAGDDDGGAVARSAEAVDAAEAFLACTRTD
RTDGLITTVVCDTAGVALGLVYSNAASIRASLESGRGVYWSRSRGGLWRK
GDTSGAWQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002496PRib_AMP_CycHydrolase_dom
IPR038019PRib_AMP_CycHydrolase_sf