prot_H-elongata_contig8076.15730.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8076.15730.1
Unique Nameprot_H-elongata_contig8076.15730.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length306
Homology
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BLAST of mRNA_H-elongata_contig8076.15730.1 vs. uniprot
Match: D7G6V9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V9_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 8.970e-31
Identity = 75/135 (55.56%), Postives = 90/135 (66.67%), Query Frame = 0 
Query:  112 VAVREEMWSQAARDRDVLETGLELKQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERDRELYAQRAALAEEGQELAREDRKRLQTAKEELERQLQETIEMEDRFRKKIIRKFKARENTLRQNFEAQLREARAGA 246
            +AVREEMW+QAARDRD LE  L L+ E                             ERDRELYAQRAALAEEGQE+ARE+R +LQ  KE L RQL+ET+EM+D  R++II KFKARE+ +R+NFEA+LREAR  A
Sbjct:    1 MAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQEIAREERNQLQAEKESLLRQLKETMEMDDASRRRIILKFKAREHAMRKNFEAELREARGEA 135
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8076.15730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6V9_ECTSI8.970e-3155.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..70
NoneNo IPR availableCOILSCoilCoilcoord: 82..117
NoneNo IPR availableCOILSCoilCoilcoord: 138..169
NoneNo IPR availableCOILSCoilCoilcoord: 181..219
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.702

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8076contigH-elongata_contig8076:5716..8624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8076.15730.1mRNA_H-elongata_contig8076.15730.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8076 5664..9815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8076.15730.1 ID=prot_H-elongata_contig8076.15730.1|Name=mRNA_H-elongata_contig8076.15730.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=306bp
MVKANGLAAYLLLAWAPACGSNYQGPPPSRSLLGRKIKKADQIRVQAARI
NRLEERIQKLSEEGAFLIERTLHYREIRLKGSQDLRDNIEELKLKLLNQQ
EDMNKDFEAKLVAVREEMWSQAARDRDVLETGLELKQEAEREKMMEEAKQ
RANEIVEEVKAKITAEAERDRELYAQRAALAEEGQELAREDRKRLQTAKE
ELERQLQETIEMEDRFRKKIIRKFKARENTLRQNFEAQLREARAGAMGGA
ARRRQSAKNDLQSASSSSSTPEGSQRAAVKSPTSKAISSGGVGGIPASTG
ATATP*
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