prot_H-elongata_contig80707.15721.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80707.15721.1
Unique Nameprot_H-elongata_contig80707.15721.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
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BLAST of mRNA_H-elongata_contig80707.15721.1 vs. uniprot
Match: D8LF58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF58_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.440e-14
Identity = 30/52 (57.69%), Postives = 43/52 (82.69%), Query Frame = 0 
Query:    3 REHPECRYSSSTSKECSSNNGKYACETILRIFKSCPNVRTEKIYEKTTTDKG 54
            ++HP+CRYS S+ KECSSNNG ++CETI R+F++CP +R E++Y+ TT D G
Sbjct:    2 KDHPDCRYSLSSQKECSSNNGSFSCETIRRVFRNCPGLRPEQVYDITTRDTG 53
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80707.15721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF58_ECTSI1.440e-1457.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80707contigH-elongata_contig80707:1051..1221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80707.15721.1mRNA_H-elongata_contig80707.15721.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80707 1051..1221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80707.15721.1 ID=prot_H-elongata_contig80707.15721.1|Name=mRNA_H-elongata_contig80707.15721.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
DSREHPECRYSSSTSKECSSNNGKYACETILRIFKSCPNVRTEKIYEKTT
TDKGTRD
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