prot_H-elongata_contig80653.15715.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80653.15715.1
Unique Nameprot_H-elongata_contig80653.15715.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 3.620e-76
Identity = 116/179 (64.80%), Postives = 143/179 (79.89%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIHYVKTEDQLADLGTKHLSKHRHRNLIKLIN 179
            M AAKH L YLAG+ DFSITYK+GGF+L+ FSD+NW NNPDN +STSSY+ +L N P+SF+ GLQGLTA STMEAELVA+AL MK AVFC NM+ ELGF + F  +P+Y DNT+ L+  GNR++S R KHI LR+FF++E+V EGKI IHY  TED LAD+GTKH +KHR  +L+ LIN
Sbjct:  255 MVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLIN 433          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 1.850e-75
Identity = 111/176 (63.07%), Postives = 139/176 (78.98%), Query Frame = 0
Query:    4 AKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIHYVKTEDQLADLGTKHLSKHRHRNLIKLIN 179
            AK  L YLAG+ DFSITYK+GGF+L+ FSD+NW NNPDN +STSSY+ +L N P+SF+ GLQGLTA STMEAELVA+AL MK AVFC NM+ ELGF + F  +P+Y DNT+ L+  GNR++S R KHI LR+FF++E+V EGKI IHY  TED LA +GTKH +KHR ++L+  IN
Sbjct:   33 AKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRIN 208          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 7.610e-74
Identity = 116/179 (64.80%), Postives = 144/179 (80.45%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIHYVKTEDQLADLGTKHLSKHRHRNLIKLIN 179
            M AAKH L YLAG+ DFSITYK+GGF+L+ FSD+NW NNPDN +STSSY+ +L N P+SF+ GLQGLTA STMEAELVA+AL MK AVFC NM+ ELG  + F  +P+Y DNT+ L+  GNR++S R KHI LR+FF++E+V EGKI IHYV TED LAD+GTKH +KHR ++L+ LIN
Sbjct:  476 MVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 1.180e-72
Identity = 116/179 (64.80%), Postives = 145/179 (81.01%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIHYVKTEDQLADLGTKHLSKHRHRNLIKLIN 179
            M AAKH L YLAG+ DFSITYK+GGF+L+ FSD+NW NNPDN +STSSY+ +L N P+SF+ GLQGLTA STMEAELVA+AL MK AVFC NM+ ELGF + F  +P+Y DNT+ L+  GNR++S R KHI LR+FF++E+V EGKI IHYV+TED LAD+GTKH + HR ++L+ LIN
Sbjct:  815 MVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLIN 993          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 2.400e-70
Identity = 115/179 (64.25%), Postives = 143/179 (79.89%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIHYVKTEDQLADLGTKHLSKHRHRNLIKLIN 179
            M AAKH L YLAG+ DFSITYK+GGF+L+ FSD+NW NNPDN +STSSY+ +L N P+SF+ GLQGLTA STMEAELVA+AL M  AVF  NM+ ELGF + F  +P+Y DNT+ L+  GNR++S R KHI LR+FF++E+V EGKI IHYV TED LAD+GTKH +KHR ++L+ LIN
Sbjct: 1484 MVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 1662          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 3.950e-70
Identity = 116/178 (65.17%), Postives = 144/178 (80.90%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIHYVKTEDQLADLGTKHLSKHRHRNLIKLI 178
            MGAAKHLL YL+GS DFSITYK+GGF L+A SDANWGNNPDN +S SSYI++++  P+SFK GLQ LTA ST+EAELVAAAL MK  +FC NM+ ELGF   F S PLYI NT+ L+V GN+T+S R KH+ LR+F+++E+V+EG+I IHY+ TED LAD+GTKHL+K RH+ LI  I
Sbjct:  509 MGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLIDKI 685          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5KCX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX7_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.700e-64
Identity = 116/256 (45.31%), Postives = 146/256 (57.03%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRY----------------------------------------------------------------------------FFVQEVVEEGKIRIHYVKTEDQLADLGTKH-LSKHRHRNLIKLIN 179
            M AAKH L YLAG+ DFSITYK+GGF+L+ FSD+NW NNPDN +STSSY+ +L N P+SF+ GLQGLTA STMEAELVA+AL MK AVFC NM+ ELGF + F  +P+Y DNT+ L+  GNR++S R KHI LR+                                                                            FF++E+V EGKI IHYV TED LAD+GTKH ++KHR ++L+ L+N
Sbjct:    1 MVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFINKHRFKHLMDLVN 256          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.370e-62
Identity = 105/178 (58.99%), Postives = 139/178 (78.09%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIHYVKTEDQLADLGTKHLSKHRHRNLIKLI 178
            MGAAKHLL YL+GS DFSITYK+GGF L+A S+AN G+N DN +S SSYI++++  P S K GLQ LTA ST+EAELVA+AL MK  +FC NM+ ELGF   F S PL+ID+T+ L V GN+T+S   KH+ LR+F+++++V+EG+I IHY+ TED LAD+GT++L+K RH+ LI  I
Sbjct:  596 MGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKI 773          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 3.440e-62
Identity = 103/178 (57.87%), Postives = 134/178 (75.28%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIHYVKTEDQLADLGTKHLSKHRHRNLIKLI 178
            MGAAK    YLAG+  F I YK+GGF+L+AF+D+NWGNNPDN +STSS++ +L + P++FK GLQ LT QSTME ELVAAAL +K AVFC N++ ELGF +    VPLY DNT+ L+  GNR+YS   KHI LR+FF++E+V EG+I IHYV  +   AD+GTKHL+K R + L+ +I
Sbjct:  538 MGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNII 715          
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.010e-57
Identity = 98/150 (65.33%), Postives = 120/150 (80.00%), Query Frame = 0
Query:    1 MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYIVILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFDESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIH 150
            MGAAKHLL    G+ DF ITYK+GGF+L+AFSDANW +NPDN RSTSSY+++++  P+SFK GLQ LT  STMEAEL+AAALTMK AVFC NM+ ELGF + FG VPLYI+NT+ L+V GN+ YS R KHI L +F V+E+V+EG I IH
Sbjct:  354 MGAAKHLL---RGTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80653.15715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE3.620e-7664.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMK0_9PHAE1.850e-7563.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JME8_9PHAE7.610e-7464.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE1.180e-7264.80Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE2.400e-7064.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE3.950e-7065.17CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KCX7_9PHAE1.700e-6445.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6R7_9PHAE1.370e-6258.99Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JG39_9PHAE3.440e-6257.87Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J6N1_9PHAE1.010e-5765.33Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..147
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 3..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80653contigH-elongata_contig80653:1910..2449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80653.15715.1mRNA_H-elongata_contig80653.15715.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80653 1910..2449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80653.15715.1 ID=prot_H-elongata_contig80653.15715.1|Name=mRNA_H-elongata_contig80653.15715.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MGAAKHLLCYLAGSADFSITYKQGGFRLSAFSDANWGNNPDNDRSTSSYI
VILTNTPISFKVGLQGLTAQSTMEAELVAAALTMKNAVFCFNMILELGFD
ESFGSVPLYIDNTSALYVAGNRTYSPRAKHIVLRYFFVQEVVEEGKIRIH
YVKTEDQLADLGTKHLSKHRHRNLIKLIN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like