prot_H-elongata_contig80625.15713.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80625.15713.1
Unique Nameprot_H-elongata_contig80625.15713.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
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BLAST of mRNA_H-elongata_contig80625.15713.1 vs. uniprot
Match: D7FK14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK14_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 7.360e-6
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 0 
Query:    1 APLLDGHVRSEILLGVTILKPVDDGGASRTEMTT 34
            APLLDGHVRSEILLGVTIL+P   G  +RTEMTT
Sbjct:  176 APLLDGHVRSEILLGVTILRPAK-GDPTRTEMTT 208
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80625.15713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK14_ECTSI7.360e-679.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80625contigH-elongata_contig80625:1717..2441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80625.15713.1mRNA_H-elongata_contig80625.15713.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80625 1717..2441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80625.15713.1 ID=prot_H-elongata_contig80625.15713.1|Name=mRNA_H-elongata_contig80625.15713.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
APLLDGHVRSEILLGVTILKPVDDGGASRTEMTTVRCTRGRVSTKNAIDF
IQNVESAVNTATFSSSSCYSLSE
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