prot_H-elongata_contig80594.15711.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80594.15711.1
Unique Nameprot_H-elongata_contig80594.15711.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length148
Homology
BLAST of mRNA_H-elongata_contig80594.15711.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.380e-62
Identity = 104/147 (70.75%), Postives = 123/147 (83.67%), Query Frame = 0
Query:    1 MCYQCAINAGNTILRAHYAMLAWRNGVPIERLAQIADETSTGGGASAAEDAAMALAQAASWTPTRMTATLAGLISRLYSPPAVIELLITLAVHFSFHRWTSVYVPRRYEVEVANFVKEHGDTIGCPRSPCTSEQAEWEDIAAKRRKQ 147
            M YQCA NA N +LRAH+A +A R+GV + RL Q+ D TSTGGG SAAEDAAMA AQAASWTPTRMTA LAGLISRL+SPPAVIELLIT++V F+ HRWTSVYVPRRYE E+  FVKE+G  +G P SPCT++Q +WE+IAA++RKQ
Sbjct:  351 MAYQCATNAENNVLRAHFAFMAMRSGVTLSRLIQVTDITSTGGGDSAAEDAAMAFAQAASWTPTRMTAALAGLISRLFSPPAVIELLITVSVEFAIHRWTSVYVPRRYEPEIDEFVKEYGPALGIPHSPCTADQQKWEEIAAQKRKQ 497          
BLAST of mRNA_H-elongata_contig80594.15711.1 vs. uniprot
Match: D7FMN7_ECTSI (Probable fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN7_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 7.550e-39
Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 0
Query:    1 MCYQCAINAGNTILRAHYAMLAWRNGVPIERLAQIADETSTGGGASAAED-------AAMALAQAASWTPTRMTATLAGLISRLYSPPAVIELLITLAVHFSFHRWTSVYVPRRYEVEVANFVKEHGDTIGC-PRSPCTSEQAEWEDIAAKRR 145
            MCY CA NAGNTILRAHYA +A RNG+PI +LA   +  S+   A AA+D       AAMALA+A S TP+ ++  L GL+ R YSP  VIEL+ T+++ F +HRWT++Y+PR YE EV  FV+EHG  +G  P  PCT +Q+ WE IA + R
Sbjct:  267 MCYICATNAGNTILRAHYAFMAHRNGMPIRQLATATNTDSSE--AVAADDTIDAKQVAAMALAEACSGTPSTVSPVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPREYEPEVLKFVQEHGAALGIDPERPCTKDQSTWEGIAKEAR 417          
BLAST of mRNA_H-elongata_contig80594.15711.1 vs. uniprot
Match: D7G5G2_ECTSI (Probable fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G2_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 5.340e-25
Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 0
Query:    8 NAGNTILRAHYAMLAWRNGVPIERLAQI-ADETSTGGGASAAEDAAMALAQAASWTPTRMTATLAGLISRLYSPPAVIELLITLAVHFSFHRWTSVYVPRRYEVEVANFVKEHGDTIGC-PRSPCTSEQAEWEDIAAKRR 145
            +A NTILRAH+A +A RNGV +  LA   A+   T GG    + AA+++A+A S T   M   L  L+ R Y+P  VIEL+ TL++     RWTS+Y+P++YE EV  FV+E+G  +   P  PCT EQ+ W ++AA+ R
Sbjct:  105 SADNTILRAHFAFMAHRNGVSVSDLANATAEGGDTDGGEDLKKAAALSMARACSGTLGPMPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQYEPEVLVFVEENGSALSLDPTKPCTEEQSGWRELAAEIR 244          
BLAST of mRNA_H-elongata_contig80594.15711.1 vs. uniprot
Match: A0A6H5JXG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG8_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.410e-13
Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 MCYQCAINAGNTILRAHYAMLAWRNGVPIERLAQI-ADETSTGGGASAAEDAAMALAQAASWTPTRMTATLAGLISRLYSPPAVIELLITLAVHFSFHRWTSVYVPRR 107
            M Y  A +A NTILRAH+A +A RNGV +  LA   A+   T GG    + AA+++A+A   TP  +   L  L+ R Y+P  VIEL+ TL++     RWTS+Y+P++
Sbjct:  292 MGYMLATSADNTILRAHFAFMAHRNGVSVSNLASATAEGGDTDGGEDLKKAAALSMARACGGTPGPLPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQ 399          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80594.15711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JWC3_9PHAE1.380e-6270.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FMN7_ECTSI7.550e-3952.29Probable fusion protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G5G2_ECTSI5.340e-2544.29Probable fusion protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXG8_9PHAE1.410e-1342.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029032AhpD-likeGENE3D1.20.1290.10coord: 1..111
e-value: 1.2E-6
score: 30.5
IPR029032AhpD-likeSUPERFAMILY69118AhpD-likecoord: 15..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80594contigH-elongata_contig80594:663..2718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80594.15711.1mRNA_H-elongata_contig80594.15711.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80594 660..2718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80594.15711.1 ID=prot_H-elongata_contig80594.15711.1|Name=mRNA_H-elongata_contig80594.15711.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
MCYQCAINAGNTILRAHYAMLAWRNGVPIERLAQIADETSTGGGASAAED
AAMALAQAASWTPTRMTATLAGLISRLYSPPAVIELLITLAVHFSFHRWT
SVYVPRRYEVEVANFVKEHGDTIGCPRSPCTSEQAEWEDIAAKRRKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029032AhpD-like