prot_H-elongata_contig80537.15705.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80537.15705.1
Unique Nameprot_H-elongata_contig80537.15705.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length177
Homology
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: A0A6H5L7V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V8_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.040e-33
Identity = 83/168 (49.40%), Postives = 98/168 (58.33%), Query Frame = 0
Query:    1 DQKLPEVYGYYGRTASPPPKARGAWSATPAPQQSDDTGQVSPEVGVIETQRD-----EKTSKGTSEENFE---ADFPVPPGMVVPSSVRQHVMMVSTARNA-----LEVLLRLKQAANEAFSFLSHEDPIHPYYIFLKSWGEARLAGEYERQQRLHAERAAQRGKKEE 155
            +++ PEVYGYYGRTASPP                                        +  KG   E FE   ADF +P G+V P++ RQH+MMV TAR A     LEVLLRLKQ ANEAFSFLSHEDP HPYY+FLKSWGE+ LA EY RQQRL AERA  R ++++
Sbjct:  168 EEEEPEVYGYYGRTASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPMKGAGGEQFEEFVADFGIPEGLVAPATFRQHMMMVGTARTAVRSPQLEVLLRLKQQANEAFSFLSHEDPAHPYYLFLKSWGESALAAEYARQQRLQAERAEARQRQDQ 335          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: D7FJ62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ62_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 3.770e-29
Identity = 65/99 (65.66%), Postives = 74/99 (74.75%), Query Frame = 0
Query:   54 KTSKGTSEENFEADFPVPPGMVVPSSVRQHVMMVSTARNA-----LEVLLRLKQAANEAFSFLSHEDPIHPYYIFLKSWGEARLAGEYERQQRLHAERA 147
            K + G   E F ADF +P  +V P++ RQH+MMV TAR A     LEVLLRLKQ ANEAFSFLS EDP+HPYY+FLKSWGE+ LA EY RQQRL AERA
Sbjct:  226 KGAGGDQFEEFVADFGIPEELVAPATFRQHMMMVGTARTAVRSPQLEVLLRLKQQANEAFSFLSDEDPVHPYYLFLKSWGESALAAEYARQQRLQAERA 324          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: UPI001F502562 (splicing factor, suppressor of white-apricot homolog isoform X1 n=5 Tax=Schistocerca TaxID=7008 RepID=UPI001F502562)

HSP 1 Score: 61.6 bits (148), Expect = 7.190e-8
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 0
Query:   50 QRDEKTSKGTSEENFEADFPVPPG------MVVPSSVRQHVMMVSTAR------NALEVLLRLKQAANEAFSFLSHEDPIHPYYIFL 124
            Q+DE TSK  +    +  F VPPG      MVVP +V+Q+ ++  TA         +E+LL++KQA N+ FSFLS +DP+H YY  L
Sbjct:  152 QQDEATSKQETAAEEDEVFIVPPGLDIPVGMVVPETVKQNAIIEKTAHFISRQGAQMEILLKMKQANNQQFSFLSFDDPLHAYYRHL 238          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: A0A8J2JL12_9HEXA (Hypothetical protein (Fragment) n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2JL12_9HEXA)

HSP 1 Score: 57.4 bits (137), Expect = 2.070e-6
Identity = 24/65 (36.92%), Postives = 43/65 (66.15%), Query Frame = 0
Query:   66 ADFPVPPGMVVPSSVRQHVMMVSTAR------NALEVLLRLKQAANEAFSFLSHEDPIHPYYIFL 124
            A+  +PP +++P++++ H ++  TA+        +E++L+ KQ+ N  F FLSH DP++PYY FL
Sbjct:  206 AELMIPPDILLPATMKSHAIIEKTAKFISSQGTQMEIILKTKQSKNPLFDFLSHNDPLNPYYKFL 270          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: A0A250X0J8_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X0J8_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 5.120e-6
Identity = 37/77 (48.05%), Postives = 45/77 (58.44%), Query Frame = 0
Query:   55 TSKGTSEEN--FEADFPVPPGM--VVPSSVRQHVMMVSTAR------NALEVLLRLKQAANEAFSFLSHEDPIHPYY 121
            TSK   EE+  F   F VP  +  VVPSS +QH ++V TAR        +EVLLR+KQA N AF FL     +HPYY
Sbjct:  227 TSKHDGEESRAFRPPFAVPTHLSDVVPSSEKQHKILVETARFVRTNGGQVEVLLRVKQAKNPAFKFLEPGHALHPYY 303          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: A0A3R7MHY1_PENVA (Uncharacterized protein n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7MHY1_PENVA)

HSP 1 Score: 55.8 bits (133), Expect = 6.730e-6
Identity = 26/66 (39.39%), Postives = 44/66 (66.67%), Query Frame = 0
Query:   67 DFPVPPGMVVPSSVRQHVMMVSTAR------NALEVLLRLKQAANEAFSFLSHEDPIHPYYIFLKS 126
            D  VPPGM+VP +V+Q+ ++V T++        +E++++ KQA N  FSFLS ++P++ YY  + S
Sbjct:  200 DLNVPPGMIVPETVKQNKIIVKTSKFIVTQGGQMEIVIKTKQAGNPMFSFLSFDNPLNAYYKHMVS 265          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: A0A4D9CNQ8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNQ8_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.220e-5
Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   63 NFEADFPVPPGMVVPSSVRQHVMMVSTARNA-----LEVLLRLKQAANEAFSFLSHEDPIHPYYIFLK 125
            +F   F VPP + +PS+ ++H ++  T+R A     LE++L++KQA N AFSFL     +H YY+F++
Sbjct:  241 DFTPSFSVPPSVCLPSTWQEHRLIGMTSRRAREDPQLEIMLKVKQADNPAFSFLYPGGRLHEYYVFMR 308          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: A0A6H5GRB5_9HEMI (Uncharacterized protein n=3 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GRB5_9HEMI)

HSP 1 Score: 55.1 bits (131), Expect = 1.290e-5
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   66 ADFPVPPGMVVPSSVRQHVMMVSTAR------NALEVLLRLKQAANEAFSFLSHEDPIHPYYIFLK 125
            A+  +PP M  P +V+ + ++  TA       + +E+L+++KQ  N+ F FLSH+DP+H YY+ LK
Sbjct:  757 AELQLPPDMDAPKTVKHNAIIERTALFLAQQGSQMEILMKVKQQGNKNFDFLSHQDPLHRYYLHLK 822          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: A0A2P2I731_9CRUS (Protein suppressor of white apricot-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I731_9CRUS)

HSP 1 Score: 54.3 bits (129), Expect = 2.210e-5
Identity = 24/56 (42.86%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   72 PGMVVPSSVRQHVMMVSTAR------NALEVLLRLKQAANEAFSFLSHEDPIHPYY 121
            PGM VP+S++QH ++V TA+      N +E++L+ KQ++N  F FLS ++ ++PYY
Sbjct:  194 PGMTVPTSIKQHKVIVKTAKFIAKQGNQMEIVLKTKQSSNPLFGFLSFDNVLNPYY 249          
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Match: A0A7S3Y7Q6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7Q6_HETAK)

HSP 1 Score: 52.8 bits (125), Expect = 6.980e-5
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   68 FPVPPGMVVPSSVRQHVMMVSTARNA-----LEVLLRLKQAANEAFSFLSHEDPIHPYYIFLKS 126
            FPVP G+ +P   R   +++ TAR       LE+LL++KQA N  F+FL+  DP+HPYY   ++
Sbjct:   35 FPVPEGVELPPDDRTDQIILVTARKIRKNPQLEILLKVKQAYNPDFAFLTPGDPLHPYYCHCRA 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80537.15705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L7V8_9PHAE1.040e-3349.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ62_ECTSI3.770e-2965.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001F5025627.190e-842.53splicing factor, suppressor of white-apricot homol... [more]
A0A8J2JL12_9HEXA2.070e-636.92Hypothetical protein (Fragment) n=1 Tax=Allacma fu... [more]
A0A250X0J8_9CHLO5.120e-648.05Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A3R7MHY1_PENVA6.730e-639.39Uncharacterized protein n=1 Tax=Penaeus vannamei T... [more]
A0A4D9CNQ8_9STRA1.220e-539.71Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6H5GRB5_9HEMI1.290e-537.88Uncharacterized protein n=3 Tax=Nesidiocoris tenui... [more]
A0A2P2I731_9CRUS2.210e-542.86Protein suppressor of white apricot-like (Fragment... [more]
A0A7S3Y7Q6_HETAK6.980e-542.19Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..171
NoneNo IPR availablePANTHERPTHR13161:SF15SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOGcoord: 51..165
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790coord: 80..127
e-value: 9.3E-7
score: 30.4
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 67..124
IPR040397Suppressor of white apricotPANTHERPTHR13161SPLICING FACTOR SUPPRESSOR OF WHITE APRICOTcoord: 51..165
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 79..121
score: 9.244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80537contigH-elongata_contig80537:1332..2815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80537.15705.1mRNA_H-elongata_contig80537.15705.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80537 1332..2815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80537.15705.1 ID=prot_H-elongata_contig80537.15705.1|Name=mRNA_H-elongata_contig80537.15705.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
DQKLPEVYGYYGRTASPPPKARGAWSATPAPQQSDDTGQVSPEVGVIETQ
RDEKTSKGTSEENFEADFPVPPGMVVPSSVRQHVMMVSTARNALEVLLRL
KQAANEAFSFLSHEDPIHPYYIFLKSWGEARLAGEYERQQRLHAERAAQR
GKKEEEDKERAEAEAAAAADATVKGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035967SWAP/Surp_sf
IPR040397SWAP
IPR000061Surp