prot_H-elongata_contig80494.15699.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80494.15699.1
Unique Nameprot_H-elongata_contig80494.15699.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 4.880e-7
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAVLLMEKVK 43
            EA  LYERS AIRE+ALG DHP VA+SLNN AVLL  +V+
Sbjct:  836 EAGKLYERSLAIREKALGPDHPDVAQSLNNWAVLLESQVR 875          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: A0A6H5L226_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L226_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 6.670e-7
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAVLL 38
            EAE LYERSQAIRE+ LG  HP VAE LNNRA LL
Sbjct:  371 EAEPLYERSQAIREKVLGPKHPDVAEVLNNRATLL 405          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: A0A6H5KMK1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK1_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 8.940e-7
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAVLLMEK 41
            EAE LYERSQAIRE+ LG +HP VA SLN+RA LL ++
Sbjct:   19 EAEPLYERSQAIREKVLGSEHPRVATSLNDRAKLLCKQ 56          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.710e-6
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAV 36
            EAE LYERSQAIRE+ LG +HP VA+SLNNR V
Sbjct:  296 EAEPLYERSQAIREKMLGPEHPDVAQSLNNRVV 328          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: A0A6H5JSR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR2_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.330e-6
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAVLL 38
            EAE LYERSQAIRE+ALG  HP VA SLN RA LL
Sbjct:    4 EAEPLYERSQAIREKALGPKHPDVARSLNKRAWLL 38          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: D7G3B0_ECTSI (Tetratricopeptide repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B0_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 4.140e-6
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAVLLMEK 41
            EAE LYERS+AIR++ L  DHP VA SLN+RA+LL +K
Sbjct:  211 EAEQLYERSEAIRDKTLDPDHPDVARSLNDRALLLDKK 248          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 5.980e-6
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAVL 37
            EA  LYERS AIRE+ LG DHP VA+SLNNRA+L
Sbjct:  803 EAGPLYERSLAIREKVLGPDHPDVAQSLNNRALL 836          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: UPI00037F2BFA (tetratricopeptide repeat protein n=1 Tax=Thiofilum flexile TaxID=125627 RepID=UPI00037F2BFA)

HSP 1 Score: 47.8 bits (112), Expect = 6.210e-6
Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    8 LYERSQAIRERALGDDHPAVAESLNNRAVL 37
            LYERS AIRE+ALG DHP VA SLNN AVL
Sbjct:    4 LYERSLAIREQALGKDHPEVATSLNNLAVL 33          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: A0A6H5K8Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z8_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 8.220e-6
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAVL 37
            +AE LYERS AIRE+ LG +HP VA+SLNNR +L
Sbjct:   21 DAEQLYERSLAIREKVLGPEHPDVAQSLNNRELL 54          
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 1.020e-5
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    4 EAEALYERSQAIRERALGDDHPAVAESLNNRAVLLMEKVKLS 45
            EA+ LYERSQAIR++ LG DHP VA  LNNRA LL  K+ LS
Sbjct:  210 EAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLL--KILLS 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80494.15699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K4D0_9PHAE4.880e-770.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L226_9PHAE6.670e-777.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMK1_9PHAE8.940e-768.42Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KIY6_9PHAE1.710e-675.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSR2_9PHAE2.330e-677.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3B0_ECTSI4.140e-665.79Tetratricopeptide repeat protein n=1 Tax=Ectocarpu... [more]
A0A6H5JJK0_9PHAE5.980e-673.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00037F2BFA6.210e-680.00tetratricopeptide repeat protein n=1 Tax=Thiofilum... [more]
A0A6H5K8Z8_9PHAE8.220e-667.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5H9_9PHAE1.020e-566.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 4..38
e-value: 4.1E-8
score: 33.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..45
e-value: 1.3E-11
score: 46.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80494contigH-elongata_contig80494:497..631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80494.15699.1mRNA_H-elongata_contig80494.15699.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80494 497..631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80494.15699.1 ID=prot_H-elongata_contig80494.15699.1|Name=mRNA_H-elongata_contig80494.15699.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
EDPEAEALYERSQAIRERALGDDHPAVAESLNNRAVLLMEKVKLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf