prot_H-elongata_contig7998.15651.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7998.15651.1
Unique Nameprot_H-elongata_contig7998.15651.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length391
Homology
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.310e-36
Identity = 101/290 (34.83%), Postives = 142/290 (48.97%), Query Frame = 0
Query:  122 VAAKSRLPKPQTAAVLAA-TQRGP-----WDIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRG 383
            +A+  RL +     VLAA T   P      DI +FH +  H  E + R T +    K  G    C  CS S+  R  + + T+ R+D++ GR+F DL G    AS GG  + ++  DDFT    + FL++KSDA +A R  +    A   P  ++I             F S  ++L IK+E TP Y+PQ+NGV ER LGL+ +  +A       L   V   K D+LW EAM +AC+  N  A S+     SPYE+ YG  P      PF    Y R  +   KL+P+G
Sbjct:    3 IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKG 290          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.900e-34
Identity = 102/290 (35.17%), Postives = 142/290 (48.97%), Query Frame = 0
Query:  122 VAAKSRLPKPQTAAVLAA-TQRGP-----WDIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRG 383
            +A+  RL +     VLAA T   P      DI +FH +  H  E + R T +    K  G    C  CS S+  R  + + T+ R+D++ GR+F+DL G    AS GG  + M+  DDFT    + FLK++SDA  A R  +    A   P  ++I             F S  ++L IK+E TP Y+PQ+NGV ER LGL+ +  +A       L   V   K D+LW EAM +AC+  N  A S+     SPYE+ YG  P      PF    Y R  +   KL+P+G
Sbjct:  223 IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKG 510          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 6.570e-34
Identity = 99/290 (34.14%), Postives = 143/290 (49.31%), Query Frame = 0
Query:  122 VAAKSRLPKPQTAAVLAA-TQRGP-----WDIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRG 383
            +A+  RL +     VLAA T   P      D+ +FH +  H  + + R T +    +  G    C  CS ++  +  + + T++R+D++ GR+F+DL G    AS GG  + M+  DDFT    + FLKHKSDA  A R  +    A   P  ++I             F S  ++L IK+E TP Y+PQ+NGV ER LGL+ +  +A       L   V   K D+LW EAM +AC+  N  A S+     SPYE+ YG  P      PF    Y R  +   KL+P+G
Sbjct:  635 IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKG 922          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 6.700e-34
Identity = 99/290 (34.14%), Postives = 143/290 (49.31%), Query Frame = 0
Query:  122 VAAKSRLPKPQTAAVLAA-TQRGP-----WDIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRG 383
            +A+  RL +     VLAA T   P      D+ +FH +  H  + + R T +    +  G    C  CS ++  +  + + T++R+D++ GR+F+DL G    AS GG  + M+  DDFT    + FLKHKSDA  A R  +    A   P  ++I             F S  ++L IK+E TP Y+PQ+NGV ER LGL+ +  +A       L   V   K D+LW EAM +AC+  N  A S+     SPYE+ YG  P      PF    Y R  +   KL+P+G
Sbjct:  342 IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKG 629          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 7.530e-34
Identity = 101/290 (34.83%), Postives = 142/290 (48.97%), Query Frame = 0
Query:  122 VAAKSRLPKPQTAAVLAA-TQRGP-----WDIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRG 383
            +A+  RL +     VLAA T   P      DI +FH +  H  E + R T +    K  G    C  CS S+  R  + + T+ R+D++ GR+F+DL G    AS GG  + M+  DDFT    + FL++KSDA +A R  +    A   P  ++I             F S  ++L IK+E TP Y+PQ+NGV ER LGL+ +  +A       L   V   K D+LW EAM +AC+  N  A S+      PYE+ YG  P      PF    Y R  +   KL+P+G
Sbjct:  101 IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKG 388          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.190e-33
Identity = 102/290 (35.17%), Postives = 142/290 (48.97%), Query Frame = 0
Query:  122 VAAKSRLPKPQTAAVLAA-TQRGP-----WDIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRG 383
            +A+  RL +     VLAA T   P      DI +FH +  H  E + R T +    K  G    C  CS S+  R  +   T+ R+D++ GR+F+DL G    AS GG  + M+  DDFT    + FL++KSDA +A R  +    A   P  ++I             F S  ++L IK+E TP Y+PQ+NGV ER LGL+ +  +A       L   V   K D+LW EAM +AC+  N  A S+     SPYE+ YG  P      PF    Y R  +   KL+P+G
Sbjct:  156 IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKG 443          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 8.450e-33
Identity = 91/262 (34.73%), Postives = 132/262 (50.38%), Query Frame = 0
Query:  146 DIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRGRA 385
            D+ +FH +  H  E + R T +   ++ +G    C  CS S+ ++  +   T+ R+D++ GR+F+DL G    AS GG  + M+  DDFT    + FLK KSDA +A R  +    A   P  ++I             F S  ++L IK+E TP Y+PQ+NGV ER LGL+    +A       L   V   K DRLW EAM +AC+  N  A S+     SPYE+ +G   +     PF    Y R  +   KL+P+G A
Sbjct:  571 DVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEA-SHARPYPFLKPAYCRWQRPS-KLLPKGEA 830          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.240e-30
Identity = 99/291 (34.02%), Postives = 141/291 (48.45%), Query Frame = 0
Query:  122 VAAKSRLPKPQTAAVLAA-TQRGP-----WDIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGR-RPTFDNIPPFGTLGYLRRSKLGHKLVPRG 383
            VA   RL      +VLAA T   P      D+  FH +  H  E + R T +   ++ +G    C  CS  +  R A+   T N +D++ GR+F++L G    AS GG  + M+  DDFT    + FL+ KSDA +A R  + +  A   P  ++I             F S  ++L IK+E TP ++P+ NGV ER LGL+ +  +A       L   V   K DRLW EAM +AC+  N  A S+     SPYE+ YG  RP      PF    Y +  +   KL+P+G
Sbjct:  362 VATAYRLGHNSIGSVLAALTPSNPKRVKIMDVNDFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPA--RPYPFLKPAYCKWQRPS-KLLPKG 649          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.620e-21
Identity = 92/291 (31.62%), Postives = 127/291 (43.64%), Query Frame = 0
Query:  122 VAAKSRLPKPQTAAVLAA-TQRGP-----WDIMKFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLA---PKSLKI------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVA-------LLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGR-RPTFDNIPPFGTLGYLRRSKLGHKLVPRG 383
            VA   RL      +VLAA T   P      D+  FH +  H  E + R T +   ++                                TGR+F+DL G    AS GG  + M+  DDFT    + FL+ KSDA +A R  + +  A   P  ++I             F S  ++L IK+E TP ++P+ NGV ER LGL+ +  +A       L   V   K DRLW EAM +AC+  N  A S+     SPYE+ YG  RP      PF    Y +  +   KL+P+G
Sbjct:  417 VATAYRLGHNSIGSVLAALTPSNPKRVKIMDVNDFHNIYGHAHEGLLRTTAKRLGIEL-------------------------------TGRVFVDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPA--RPYPFLKPAYCKWQRPS-KLLPKG 673          
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Match: A0A1Y1M2G6_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1M2G6_PHOPY)

HSP 1 Score: 106 bits (264), Expect = 4.720e-21
Identity = 73/250 (29.20%), Postives = 115/250 (46.00%), Query Frame = 0
Query:  149 KFHQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENRADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDATNALRDIINDYLAPKSLKI--------------GFLSFLSKLGIKRESTPPYTPQHNGVVERVLGLLRDKTVALLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYELRYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRGR 384
            ++H  L HP++  TR    +  +K + + + C  C+   + R   P+ T NR       +  D+ GP    S GG R+V+  IDD++ +  +  ++HKS+  N   D           KI               F ++L   GI+RE T PYTPQ NGV ER+   L + T  L+     G  D  W EA+  A  IRNR   +S + G +PYE+   R     ++  FG   + + ++   K  P+G+
Sbjct:  431 EWHARLGHPSKNETRELANLYNLKINAMQKSCDTCNVXNIKRKKFPRMTANRRRNCLDLIHSDVIGPITPYSRGGRRYVVTFIDDYSRYAEIYTIRHKSEVLNKFIDYQKKVERMHDRKIKELRSDNGGEYLNRDFETYLRTQGIRRELTTPYTPQQNGVAERLNQTLLNITRCLMN--QSGAYDDFWGEAILTANYIRNRRPTTS-NEGKTPYEIWSNRVTGVTHMRSFGCKCWYKNNQPKQKYQPQGK 677          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7998.15651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVR5_9PHAE2.310e-3634.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV76_9PHAE1.900e-3435.17Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JBA7_9PHAE6.570e-3434.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE6.700e-3434.14Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3Y0_9PHAE7.530e-3434.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL9_9PHAE1.190e-3335.17Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K2M6_9PHAE8.450e-3334.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE1.240e-3034.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K622_9PHAE4.620e-2131.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y1M2G6_PHOPY4.720e-2129.20Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 194..367
e-value: 2.0E-20
score: 74.8
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 147..252
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 147..252
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 175..355
score: 12.869
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 200..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7998contigH-elongata_contig7998:7059..8270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7998.15651.1mRNA_H-elongata_contig7998.15651.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7998 5964..8309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7998.15651.1 ID=prot_H-elongata_contig7998.15651.1|Name=mRNA_H-elongata_contig7998.15651.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=391bp
MTQDPAGLEDYTPAPAGNRVESAGGTLLPVAGYGHLRLRVDQGNDNFTDS
TRQLTLKHVAHVPNLGQHNILSTKRLTQFFDPPMRVYPAAAVIRPRRGGM
PLLFRPLRPENGLLEIKVRRHVAAKSRLPKPQTAAVLAATQRGPWDIMKF
HQVLRHPAEQITRNTVRMACVKSSGIWRPCVHCSESRVWRYAVPKSTENR
ADRRTGRLFIDLSGPFHDASFGGNRFVMLCIDDFTHFKMVRFLKHKSDAT
NALRDIINDYLAPKSLKIGFLSFLSKLGIKRESTPPYTPQHNGVVERVLG
LLRDKTVALLRGVMEGKRDRLWVEAMAYACDIRNRCAFSSLDSGTSPYEL
RYGRRPTFDNIPPFGTLGYLRRSKLGHKLVPRGRAASCSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf