prot_H-elongata_contig79232.15585.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79232.15585.1
Unique Nameprot_H-elongata_contig79232.15585.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length160
Homology
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BLAST of mRNA_H-elongata_contig79232.15585.1 vs. uniprot
Match: D7FXW2_ECTSI (Phosphotransferase system component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW2_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 7.460e-29
Identity = 86/167 (51.50%), Postives = 105/167 (62.87%), Query Frame = 0 
Query:    1 FEARTSQR--RTREIPFDSNRVALVGSSGGGAAAQGQLDGLSLLLLAREELFWAKIKLAAVQCLASSEPLDAAPPSTAAMPWV---DPGKEELVVAARGTPSEVNVVAAREDTKISTALQAGA--KSVAASVLSRGTDDSDVVGCHATSLPPLHGLVTISCDVNGVN 160
            F  RTS R   T +    + RVALVGSSGGGAAAQGQ DG +LL LA++EL  A I LAAVQ +A +EPLD A PS+AA  WV     G E LVVAA GT  +VN+ A +ED KI+ AL+ G      A +   RG + +      +  + PLHGLV ISCDV+GVN
Sbjct:  208 FTERTSSRCYDTDDAASFAKRVALVGSSGGGAAAQGQFDGPALLRLAKKELERAGIHLAAVQFVACAEPLDLANPSSAATLWVAGTGEGDEALVVAAEGTLLDVNMAARKEDVKIAAALREGCGRHDDAPTQSPRGANTAT-----SPKMLPLHGLVAISCDVHGVN 369
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79232.15585.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXW2_ECTSI7.460e-2951.50Phosphotransferase system component n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79232contigH-elongata_contig79232:1289..2336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79232.15585.1mRNA_H-elongata_contig79232.15585.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79232 1289..2336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79232.15585.1 ID=prot_H-elongata_contig79232.15585.1|Name=mRNA_H-elongata_contig79232.15585.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
FEARTSQRRTREIPFDSNRVALVGSSGGGAAAQGQLDGLSLLLLAREELF
WAKIKLAAVQCLASSEPLDAAPPSTAAMPWVDPGKEELVVAARGTPSEVN
VVAAREDTKISTALQAGAKSVAASVLSRGTDDSDVVGCHATSLPPLHGLV
TISCDVNGVN
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