prot_H-elongata_contig78235.15492.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78235.15492.1
Unique Nameprot_H-elongata_contig78235.15492.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig78235.15492.1 vs. uniprot
Match: A0A6H5KNM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM8_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.530e-10
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    2 ITMNCSTPDATIRYTTDGSS-PNEESSAVASGSRLEWSVEGITEFKVRAFADELYRSDV 59
            ITMNCSTP+AT+RYTTDG S P + S +V  G+ ++WS EG  EF+V A AD LY+S++
Sbjct:  414 ITMNCSTPNATVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLYQSEL 472          
BLAST of mRNA_H-elongata_contig78235.15492.1 vs. uniprot
Match: D8LI16_ECTSI (NAGPA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI16_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 5.420e-10
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    2 ITMNCSTPDATIRYTTDGSS-PNEESSAVASGSRLEWSVEGITEFKVRAFADELYRSDV 59
            ITMNCSTP+ T+RYTTDG S P + S +V  G+ ++WS EG  EF+V A AD LY+S++
Sbjct:  397 ITMNCSTPNTTVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLYQSEL 455          
BLAST of mRNA_H-elongata_contig78235.15492.1 vs. uniprot
Match: A0A2N2KVY0_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-3 TaxID=2013735 RepID=A0A2N2KVY0_9BACT)

HSP 1 Score: 48.5 bits (114), Expect = 5.830e-5
Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MITMNCSTPDATIRYTTDGSSPNEESSAVASGSRLEWSVEGITEFKVRAF 50
            ++TM+CSTP A IRYTTDG+ P++ S+  ++ S +  +V G T FKV+AF
Sbjct: 1079 IVTMSCSTPSAQIRYTTDGTEPDQSSTLYSNSSTI--TVVGTTLFKVKAF 1126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78235.15492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KNM8_9PHAE1.530e-1057.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI16_ECTSI5.420e-1055.93NAGPA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A2N2KVY0_9BACT5.830e-550.00Por_Secre_tail domain-containing protein n=1 Tax=C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13290CHB_HEX_C_1coord: 2..60
e-value: 1.3E-9
score: 37.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78235contigH-elongata_contig78235:1007..1189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78235.15492.1mRNA_H-elongata_contig78235.15492.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78235 1007..1210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78235.15492.1 ID=prot_H-elongata_contig78235.15492.1|Name=mRNA_H-elongata_contig78235.15492.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MITMNCSTPDATIRYTTDGSSPNEESSAVASGSRLEWSVEGITEFKVRAF
ADELYRSDVKS
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