prot_H-elongata_contig76563.15327.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76563.15327.1
Unique Nameprot_H-elongata_contig76563.15327.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: D7FQB7_ECTSI (UDG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB7_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.060e-83
Identity = 135/218 (61.93%), Postives = 151/218 (69.27%), Query Frame = 0
Query:    1 PEWPLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDDCPITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGA------GTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVIAPPR---------FARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PEWPLRLIIVGHNPSEKAWELGHYY NPSNRMWKLL++AGI+P GF A ND+DCPIT GVGFTD GFS PGT+S  F K ELH+WR+GFYDRL AHA RAAATV       A      GT +  AA K +     TA    A IE G P+++AFAGKRQ       A  +            FRFGLQ ADLRPPGWPFPA  T++FV+PSSSGAAAM
Sbjct:   77 PEWPLRLIIVGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPPGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLTAHAERAAATVAASKSYPAEPATERGTDSTSAAGKGADQGVATAATIKAKIEDGCPRIIAFAGKRQWEELFFDASAKDKAKTKGGKTGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAM 294          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: A0A4D9CYU0_9STRA (UDG domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYU0_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.920e-48
Identity = 93/204 (45.59%), Postives = 111/204 (54.41%), Query Frame = 0
Query:    1 PEWPLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDDCPITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVIAPP-RFARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PE PLRL++VGHNPS  AW  GHYY+NPSNRMW LL    I+P G+ A +DD CP TCG+GFTD G+ +PGT S  FK   LHAWR+  Y RL +HA RA                                       G  P++VAF GKRQ       +   +     +GLQSA  RP G+PF A  T +FVL SSSGAAAM
Sbjct:  101 PERPLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSAKFKAPVLHAWRRSLYQRLLSHARRA---------------------------------------GAPPKIVAFTGKRQFRELFFDSKAYKSISISYGLQSA--RPDGFPFNANETKLFVLTSSSGAAAM 263          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: W7TJD2_9STRA (Uracil-dna glycosylase superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJD2_9STRA)

HSP 1 Score: 167 bits (424), Expect = 6.700e-47
Identity = 93/204 (45.59%), Postives = 111/204 (54.41%), Query Frame = 0
Query:    1 PEWPLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDDCPITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVIAPP-RFARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PE PLRL++VGHNPS  AW  GHYY+NPSNRMW LL    I+P G+ A +DD CP TCG+GFTD G+ +PGT S  FK   LHAWR+  Y RL +HA RA                                       G  P++VAF GKRQ       +   +     +GLQSA  RP G+PF A  T +FVL SSSGAAAM
Sbjct:  204 PERPLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSSNFKAPVLHAWRRSLYQRLLSHARRA---------------------------------------GAPPKIVAFTGKRQFRELFFDSKAYKSISISYGLQSA--RPDGFPFNADETKLFVLTSSSGAAAM 366          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: A0A150H3T8_GONPE (UDG domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3T8_GONPE)

HSP 1 Score: 147 bits (371), Expect = 2.930e-40
Identity = 90/204 (44.12%), Postives = 107/204 (52.45%), Query Frame = 0
Query:    4 PLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDD-CPITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVIAPP---RFARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PLRL+IVGHNPSE AW+ GHYY+NPSN MW++L + GI P G     DDD  P   GVGF D G  HPGT S  F      AW + FY RL AH  RAAA++                      T G           G P++VAF+GKRQ    + +      R     FG QS    P GWPFP R T+V+V  S+SGAAAM
Sbjct:   49 PLRLVIVGHNPSEHAWQSGHYYSNPSNLMWRILISTGIAPPGTRGAEDDDRLPREAGVGFLDVGCGHPGTDSSSFASEVFDAWSRAFYSRLKAHMARAAASIG--------------------CTCGLC---------GAPRLVAFSGKRQFLELLNVGRSGRDRAKTVEFGPQSE--LPRGWPFP-RSTEVWVCSSTSGAAAM 220          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: A0A383VAW5_TETOB (UDG domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VAW5_TETOB)

HSP 1 Score: 149 bits (375), Expect = 3.630e-40
Identity = 89/211 (42.18%), Postives = 109/211 (51.66%), Query Frame = 0
Query:    4 PLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDDC-PITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKR---QVSNSIVIAPPRFARFR-------FGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PLRLI++GHNPSE AW  GHYY+NPSNRMW++L +AGI P G +    DD  P   GVGFTD G   PGT S +F   +   WR  FY RLAAH   A+ ++        G S  R                      G P++VAF GKR   ++ N       R  + R        GLQ     PPGWP PA  T+V+VL S+SGAA M
Sbjct:  125 PLRLILIGHNPSEHAWHTGHYYSNPSNRMWRILESAGITPPGVSGPEADDVMPAAVGVGFTDVGSGQPGTDSSLFTAADFQGWRAAFYARLAAHMKAASDSI--------GCSCGRC---------------------GAPRLVAFTGKRHYLELLNLDASGQQRRGKDRVASAAVTLGLQPQQQLPPGWPLPADKTEVWVLTSTSGAAPM 306          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: I0YXE6_COCSC (Uncharacterized protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YXE6_COCSC)

HSP 1 Score: 136 bits (343), Expect = 1.040e-36
Identity = 81/206 (39.32%), Postives = 106/206 (51.46%), Query Frame = 0
Query:    2 EWPLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDDCPIT-CGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVIAPP---RFARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            + PLRLI+ G+NPS+ AW  GHYY++P+N MW++L   GI PA      DD+  +T  GVGF D G  HPGT+   F      +W   FY RL  H +RA+                    K+S    G           G P VV FAGKRQ    + +      ++ +   GLQ   +RP GWPFPA  T+V+VLPS+SGAA M
Sbjct:   13 DMPLRLIVGGNNPSDHAWSTGHYYSHPANWMWRILRKTGIAPAWVKGAQDDERMVTEAGVGFLDVGCGHPGTLLSEFSSQTFQSWAPAFYTRLKMHMDRAS--------------------KNSGCVCGKC---------GAPAVVGFAGKRQWMELLNVGRKGRDKYTKLDHGLQH--MRPEGWPFPAS-TEVWVLPSTSGAAPM 186          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: A0A8J4AKJ5_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AKJ5_9CHLO)

HSP 1 Score: 144 bits (362), Expect = 1.210e-36
Identity = 83/204 (40.69%), Postives = 104/204 (50.98%), Query Frame = 0
Query:    4 PLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDD-CPITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVIAPP---RFARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PLRL+IVGHNPS  AW+ GHYY++P+N MW+LL   GI P G  +  DDD  P   GVGF D G  HPGT S  F      +W Q FY RL  H +RA+A++                      + G           G P +VAF+GKR     + +  P   R      G Q   L P GWPFPA  T+V+V  S+SGAAA+
Sbjct:  328 PLRLVIVGHNPSAHAWQSGHYYSHPANHMWRLLIATGIAPPGTRSAEDDDRLPAAAGVGFLDVGCGHPGTDSSSFSSEVFKSWSQAFYARLKGHMDRASASIG--------------------CSCGLC---------GAPSLVAFSGKRHYLELLNVGKPPKERVKTVEHGPQK--LLPAGWPFPAAATEVWVCSSTSGAAAL 500          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: A0A836C5L0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C5L0_9CHLO)

HSP 1 Score: 140 bits (352), Expect = 6.940e-36
Identity = 84/204 (41.18%), Postives = 104/204 (50.98%), Query Frame = 0
Query:    4 PLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDD-CPITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVIAPPRFARFR---FGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PLRL++VGHNPS  AW  GHYY+NPSN MW++L   GI P G     DDD  P   GVGF D G  HPGT S  F   +   W   FY RL AH  RA A++        G + P  A                    G P +VAF+GKRQ    + +      R +   +G Q+  L P GWP P R T+V+V  S+SGAAA+
Sbjct:  172 PLRLVVVGHNPSAHAWASGHYYSNPSNHMWRILIATGIAPPGTRGAQDDDRLPGAAGVGFLDVGCGHPGTDSSQFSSADFERWSSAFYARLRAHVARAGASI--------GCTCPGGAC-------------------GAPSLVAFSGKRQFLELLNVGRSGRGRVKSVEYGPQT--LLPTGWPLP-RSTEVWVCSSTSGAAAL 345          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: A0A5J4XIV9_9CHLO (DNA glycosylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XIV9_9CHLO)

HSP 1 Score: 137 bits (344), Expect = 8.510e-36
Identity = 84/205 (40.98%), Postives = 107/205 (52.20%), Query Frame = 0
Query:    4 PLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDDCPIT-CGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATV-TTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVIAPP---RFARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PLRLIIVGHNPS+ AW  GHYY+NPSN MW++L    I P+       DDC  +  GVGFTD G   PGTIS  F       W  GFY+RL+AH +RA+ ++  T  K GA                              P +VAF+GKRQ S  I        +  +F  G Q+  +RP GWP P   T+V+V+ S+SGA+ M
Sbjct:  117 PLRLIIVGHNPSDHAWRTGHYYSNPSNWMWRILIATRIAPSHVTGPQHDDCMASDAGVGFTDVGSGIPGTISSQFDSATFQGWGAGFYERLSAHMSRASDSIGCTCGKCGA------------------------------PALVAFSGKRQWSELINTGRKGKNKLTKFATGPQN--MRPEGWPLPDS-TEVWVMTSTSGASPM 288          
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Match: A0A8J4FEP7_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FEP7_9CHLO)

HSP 1 Score: 139 bits (350), Expect = 3.480e-35
Identity = 84/204 (41.18%), Postives = 105/204 (51.47%), Query Frame = 0
Query:    4 PLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACNDDD-CPITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRAAATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAGKRQVSNSIVI--AP-PRFARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGAAAM 203
            PLRL+IVGHNPS  AW+ GHYY++P+N MW+LL   GI P G  +  DDD  P   GVGF D G  HPGT S  F      +W Q FY +L AH  RA+A++                      + G           G P +VAF+GKR     + +  AP  R      G Q   L P GWPFPA  T+V+V  S+SGAAA+
Sbjct:  260 PLRLVIVGHNPSAHAWQSGHYYSHPANHMWRLLIATGIAPPGTRSAEDDDRLPAAAGVGFLDVGCGHPGTDSASFSSEVFKSWSQVFYAQLKAHMGRASASIG--------------------CSCGLC---------GAPSLVAFSGKRHYLELLNVDKAPRERVKSVEHGPQQ--LLPGGWPFPATTTEVWVCSSTSGAAAL 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76563.15327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB7_ECTSI1.060e-8361.93UDG domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CYU0_9STRA1.920e-4845.59UDG domain-containing protein n=1 Tax=Nannochlorop... [more]
W7TJD2_9STRA6.700e-4745.59Uracil-dna glycosylase superfamily n=1 Tax=Nannoch... [more]
A0A150H3T8_GONPE2.930e-4044.12UDG domain-containing protein n=1 Tax=Gonium pecto... [more]
A0A383VAW5_TETOB3.630e-4042.18UDG domain-containing protein n=1 Tax=Tetradesmus ... [more]
I0YXE6_COCSC1.040e-3639.32Uncharacterized protein (Fragment) n=1 Tax=Coccomy... [more]
A0A8J4AKJ5_9CHLO1.210e-3640.69Uncharacterized protein n=2 Tax=Volvox africanus T... [more]
A0A836C5L0_9CHLO6.940e-3641.18Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A5J4XIV9_9CHLO8.510e-3640.98DNA glycosylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2... [more]
A0A8J4FEP7_9CHLO3.480e-3541.18Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 2..114
e-value: 4.3E-15
score: 57.5
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 115..203
e-value: 5.6E-7
score: 31.6
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 4..86
IPR015637G/U mismatch-specific DNA glycosylasePANTHERPTHR12159G/T AND G/U MISMATCH-SPECIFIC DNA GLYCOSYLASEcoord: 5..202
NoneNo IPR availablePANTHERPTHR12159:SF9G/T MISMATCH-SPECIFIC THYMINE DNA GLYCOSYLASEcoord: 5..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76563contigH-elongata_contig76563:808..2012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76563.15327.1mRNA_H-elongata_contig76563.15327.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76563 808..2012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76563.15327.1 ID=prot_H-elongata_contig76563.15327.1|Name=mRNA_H-elongata_contig76563.15327.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
PEWPLRLIIVGHNPSEKAWELGHYYANPSNRMWKLLATAGIVPAGFAACN
DDDCPITCGVGFTDQGFSHPGTISGVFKKTELHAWRQGFYDRLAAHANRA
AATVTTVNKEGAGTSAPRAAKKDSKLTTGTAQNGSADIEGGYPQVVAFAG
KRQVSNSIVIAPPRFARFRFGLQSADLRPPGWPFPARFTDVFVLPSSSGA
AAM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf
IPR015637MUG/TDG