prot_H-elongata_contig75898.15276.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig75898.15276.1
Unique Name	prot_H-elongata_contig75898.15276.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	146

Homology

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BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 6.760e-56
Identity = 89/144 (61.81%), Postives = 109/144 (75.69%), Query Frame = 0

Query:    2 IQEIVYDEGKAEPEQPRYVVVKLDGYTEAHWSNEDRYRGCVPIAPVETSWSAPGQDHEGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRL 145
            + E+V  +    P+ P YVVVK +GY+   WS+++RYR CVPI+PV+T+W       +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE RL
Sbjct:  129 VVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 266

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BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 5.040e-54
Identity = 89/144 (61.81%), Postives = 109/144 (75.69%), Query Frame = 0

Query:    2 IQEIVYDEGKAEPEQPRYVVVKLDGYTEAHWSNEDRYRGCVPIAPVETSWSAPGQDHEGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRL 145
            + E+V  +    P+ P YVVVK +GY+   WS+++RYR CVPI+PV+T+W       +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE RL
Sbjct:  303 VVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 440

[Close]

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 7.460e-54
Identity = 89/144 (61.81%), Postives = 109/144 (75.69%), Query Frame = 0

Query:    2 IQEIVYDEGKAEPEQPRYVVVKLDGYTEAHWSNEDRYRGCVPIAPVETSWSAPGQDHEGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRL 145
            + E+V  +    P+ P YVVVK +GY+   WS+++RYR CVPI+PV+T+W       +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE RL
Sbjct:   20 VVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 157

[Close]

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.310e-50
Identity = 87/142 (61.27%), Postives = 107/142 (75.35%), Query Frame = 0

Query:    2 IQEIVYDEGKAEPEQPRYVVVKLDGYTEAHWSNEDRYRGCVPIAPVETSWSAPGQDHEGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEEC 143
            + E+V  +    P+ P YVVVK +GY+   WS+++RYR CVPI+PV+T+W       +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE 
Sbjct: 1434 VVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEA 1569

[Close]

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.030e-38
Identity = 65/87 (74.71%), Postives = 73/87 (83.91%), Query Frame = 0

Query:   59 EGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRL 145
            +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE RL
Sbjct:    9 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 95

[Close]

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 2.360e-38
Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 0

Query:   51 WSAPGQDHEGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRL 145
            WS   +D  GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE RL
Sbjct:   67 WSTGRKD--GGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 159

[Close]

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 6.530e-38
Identity = 65/87 (74.71%), Postives = 73/87 (83.91%), Query Frame = 0

Query:   59 EGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRL 145
            +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE RL
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 93

[Close]

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 4.530e-37
Identity = 63/84 (75.00%), Postives = 71/84 (84.52%), Query Frame = 0

Query:   59 EGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEE 142
            +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEE 90

[Close]

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.470e-36
Identity = 65/87 (74.71%), Postives = 73/87 (83.91%), Query Frame = 0

Query:   59 EGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRL 145
            +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+ P +KAR QEE RL
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 93

[Close]

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 9.060e-36
Identity = 63/87 (72.41%), Postives = 71/87 (81.61%), Query Frame = 0

Query:   59 EGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACTGLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRL 145
            +GGT  RTQLP +L WAI MHKSQGQTL+K VIDLG KEACTGLTFVCLSRAK+L DL+VEPMSFDR+  LG+   +K R QEE RL
Sbjct:    4 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNLGNSSTMKGRLQEEVRL 90

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot

BLAST of mRNA_H-elongata_contig75898.15276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUS2_9PHAE	6.760e-56	61.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFG8_9PHAE	5.040e-54	61.81	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4U7_9PHAE	7.460e-54	61.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L976_9PHAE	1.310e-50	61.27	ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ...	[more]
A0A6H5KSF1_9PHAE	1.030e-38	74.71	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMH2_9PHAE	2.360e-38	71.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCP5_9PHAE	6.530e-38	74.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFN2_9PHAE	4.530e-37	75.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN08_9PHAE	1.470e-36	74.71	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K214_9PHAE	9.060e-36	72.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23274:SF32	ATP-DEPENDENT DNA HELICASE PIF1	coord: 3..118
None	No IPR available	PANTHER	PTHR23274	DNA HELICASE-RELATED	coord: 3..118
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 44..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig75898	contig	H-elongata_contig75898:511..948 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig75898.15276.1	mRNA_H-elongata_contig75898.15276.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig75898 511..948 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig75898.15276.1 ID=prot_H-elongata_contig75898.15276.1|Name=mRNA_H-elongata_contig75898.15276.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
VIQEIVYDEGKAEPEQPRYVVVKLDGYTEAHWSNEDRYRGCVPIAPVETS
WSAPGQDHEGGTMTRTQLPFKLYWAIPMHKSQGQTLSKVVIDLGEKEACT
GLTFVCLSRAKKLTDLLVEPMSFDRLYGLGDKPVLKARRQEECRLK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase