prot_H-elongata_contig7533.15218.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7533.15218.1
Unique Nameprot_H-elongata_contig7533.15218.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length774
Homology
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: D7FRF0_ECTSI (Tesmin-like, animal TCX proteins are associated with development of both male and female reproductiv n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF0_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 3.870e-64
Identity = 110/128 (85.94%), Postives = 117/128 (91.41%), Query Frame = 0
Query:  282 GATEPGQITCNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFEKRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYEGAAGGRKRRAAES 409
            G  +P  +TCNCKKSKCLKLYCECFQR+QYC+ CNC ECLNT RTEDLRQ+AIQGTIERNP AF SKFE+RAGKRSHNAGCNCKKSACLKKYCECFQAGVACG+NCKC NCKNYEGAAGGRKRRA ES
Sbjct:  431 GGRDPLSVTCNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVES 558          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A6H5KNX0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX0_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 5.360e-62
Identity = 110/133 (82.71%), Postives = 117/133 (87.97%), Query Frame = 0
Query:  277 LGDVAGATEPGQITCNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFEKRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYEGAAGGRKRRAAES 409
            L    G  +P  +TCNCKKSKCLKLYCECFQR+QYC  CNC ECLNT RTEDLRQ+AIQGT+ERNP AF SKFE+RAGKRSHNAGCNCKKSACLKKYCECFQAGVACG+NCKC NCKNYEGAAGGRKRRA ES
Sbjct:  666 LAGCGGGRDPLLVTCNCKKSKCLKLYCECFQRQQYCKGCNCMECLNTERTEDLRQLAIQGTMERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVES 798          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A7S3YLM9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLM9_HETAK)

HSP 1 Score: 146 bits (369), Expect = 8.880e-37
Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 0
Query:  291 CNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFEKRA-GKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKN 394
            CNCKKSKCLKLYCECF   +YC  CNC +C N P TE  RQ AI+  +ERNP AF SK  + A  K+ H+ GCNCKKS+CLKKYCECFQAGV C + CKC  C N
Sbjct:   46 CNCKKSKCLKLYCECFAAGKYCGACNCVDCQNAPATEAQRQDAIKAILERNPKAFSSKINREALHKQHHSTGCNCKKSSCLKKYCECFQAGVPCSARCKCAACLN 150          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A7S2SM18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM18_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.030e-36
Identity = 70/132 (53.03%), Postives = 89/132 (67.42%), Query Frame = 0
Query:  276 VLGDVAGATEPGQITCNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFEKRA-GKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYEGAAGGRKRRA 406
            VL    G   P +  CNCK SKCLKLYC+CF    YC+ CNCK+C N P  E  RQ A Q T+E+NP AF++K +K   G   H++GC+CKKS CLKKYCECF+A V CG  CKC +C+NY G+   ++R+A
Sbjct:   12 VLTAAPGKPAPRRKACNCKNSKCLKLYCDCFASSIYCNGCNCKDCHNNPEHEAERQDARQSTLEKNPNAFQAKIKKGGQGGSEHSSGCHCKKSKCLKKYCECFEALVFCGEKCKCLDCENYAGSIALQERKA 143          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A7S3FM75_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FM75_9CHLO)

HSP 1 Score: 147 bits (372), Expect = 2.220e-35
Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = 0
Query:  284 TEPGQITCNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFEKRAGKRS------HNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYEGAA 399
            T P +  CNCK+S+CLKLYCECF    YC DCNC++C N    E +RQ A++ T+ERNP AF  K +  +   S      HN GCNCK+S CLK+YCECFQA + C  NC+C +CKNYEG+A
Sbjct:  102 TTPKKRKCNCKQSRCLKLYCECFASGIYCQDCNCQDCYNNKEHEQVRQEAVEATLERNPDAFRPKIQSMSPGMSVQDSLKHNKGCNCKRSFCLKRYCECFQANIFCSENCRCKDCKNYEGSA 223          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A7S3AJR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJR0_9EUKA)

HSP 1 Score: 141 bits (356), Expect = 5.530e-35
Identity = 64/108 (59.26%), Postives = 75/108 (69.44%), Query Frame = 0
Query:  291 CNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFEKRAGK--RSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYE 396
            CNCK S+CLKLYCECF   QYC  CNC+ C N P  +D R+ AI+ T+ERNP AF  K    AG   R H  GC+C+KS+CLKKYCECFQ G+ C + CKC  CKNYE
Sbjct:    7 CNCKNSRCLKLYCECFASGQYCLACNCQSCHNNPENDDKRKRAIKSTLERNPQAFRPKIN-HAGDTLRRHTRGCHCRKSSCLKKYCECFQGGIKCTAMCKCAGCKNYE 113          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A5J4YAE3_9CHLO (CRC domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YAE3_9CHLO)

HSP 1 Score: 148 bits (373), Expect = 6.580e-35
Identity = 66/115 (57.39%), Postives = 76/115 (66.09%), Query Frame = 0
Query:  291 CNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFEKRA-------GKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYEGA 398
            CNCK S+CLKLYCECF   +YC  CNC  C N    E  RQ A++  +ERNP AF  K +  A       G   HN GCNCKKS CLKKYCECFQAG+ CG NCKC +CKN+EG+
Sbjct:   63 CNCKNSRCLKLYCECFASGRYCDGCNCVNCCNNMENESTRQSAVEAILERNPNAFRPKIQAGASEEGTVAGTARHNKGCNCKKSGCLKKYCECFQAGIYCGDNCKCIDCKNFEGS 177          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A087SIS7_AUXPR (Lin-54-like protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIS7_AUXPR)

HSP 1 Score: 147 bits (370), Expect = 9.690e-35
Identity = 66/115 (57.39%), Postives = 79/115 (68.70%), Query Frame = 0
Query:  291 CNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKF-----EKRA--GKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYEGA 398
            CNCK S+CLKLYCECF   +YC  CNC  C N  + E +RQ A++  ++RNP AF  K      E+ A  G   HN GCNCKKS CLKKYCECFQAG+ C  NCKCC+CKNY+G+
Sbjct:   40 CNCKNSRCLKLYCECFASGRYCDGCNCVGCCNNQQNEGVRQSAVEAILDRNPNAFRPKIAGDVTEEGASLGAARHNKGCNCKKSGCLKKYCECFQAGIFCSENCKCCDCKNYDGS 154          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A0M0JDD9_9EUKA (Tesmin tso1-like cxc domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JDD9_9EUKA)

HSP 1 Score: 143 bits (361), Expect = 1.120e-34
Identity = 62/106 (58.49%), Postives = 72/106 (67.92%), Query Frame = 0
Query:  290 TCNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFEK-RAGKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKN 394
            TCNC+ S+CLKLYCECF   QYC  CNC+ C N P  ++LR+ AI+ T+ERN  AF  K         +HN GCNCKKS CLKKYCECFQAG+ C   CKC NC N
Sbjct:   36 TCNCRNSRCLKLYCECFASGQYCYGCNCQSCFNNPENDELRKQAIESTLERNQQAFRPKISSTEQASSAHNRGCNCKKSGCLKKYCECFQAGIKCADTCKCVNCLN 141          
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Match: A0A2P6VRN3_9CHLO (Tesmin TSO1-like CXC 5 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRN3_9CHLO)

HSP 1 Score: 149 bits (375), Expect = 7.130e-34
Identity = 67/117 (57.26%), Postives = 78/117 (66.67%), Query Frame = 0
Query:  287 GQITCNCKKSKCLKLYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFE-----KRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYEGA 398
            G+  CNCK S+CLKLYCECF   +YC  CNC  C N    E  RQ A++  +ERNP AF  K       + +G   HN GCNCKKS CLKKYCECFQAG+AC  NCKC +CKNYEG+
Sbjct:  118 GKRHCNCKNSRCLKLYCECFASGRYCDACNCLNCHNNRAHESTRQAAVEAILERNPNAFRPKIAGGSEGRHSGGARHNKGCNCKKSGCLKKYCECFQAGIACSDNCKCLDCKNYEGS 234          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7533.15218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRF0_ECTSI3.870e-6485.94Tesmin-like, animal TCX proteins are associated wi... [more]
A0A6H5KNX0_9PHAE5.360e-6282.71CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3YLM9_HETAK8.880e-3763.81Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SM18_9STRA1.030e-3653.03Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3FM75_9CHLO2.220e-3554.10Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A7S3AJR0_9EUKA5.530e-3559.26Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A5J4YAE3_9CHLO6.580e-3557.39CRC domain-containing protein n=1 Tax=Trebouxia sp... [more]
A0A087SIS7_AUXPR9.690e-3557.39Lin-54-like protein n=2 Tax=Auxenochlorella protot... [more]
A0A0M0JDD9_9EUKA1.120e-3458.49Tesmin tso1-like cxc domain-containing protein n=1... [more]
A0A2P6VRN3_9CHLO7.130e-3457.26Tesmin TSO1-like CXC 5 n=1 Tax=Micractinium conduc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 286..326
e-value: 1.6E-9
score: 47.7
coord: 357..398
e-value: 9.4E-16
score: 68.3
IPR005172CRC domainPFAMPF03638TCRcoord: 289..323
e-value: 1.8E-11
score: 44.2
coord: 360..395
e-value: 3.8E-11
score: 43.1
IPR005172CRC domainPROSITEPS51634CRCcoord: 287..397
score: 30.978
NoneNo IPR availablePANTHERPTHR12446:SF34PROTEIN LIN-54 HOMOLOGcoord: 148..540
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 148..540

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7533contigH-elongata_contig7533:3335..5904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7533.15218.1mRNA_H-elongata_contig7533.15218.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7533 612..6334 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7533.15218.1 ID=prot_H-elongata_contig7533.15218.1|Name=mRNA_H-elongata_contig7533.15218.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=774bp
MDRGWSEDWESRRVVEQNREDGGSDNGDGGNKTWECSGVGNAPHTAPVKR
HKRWANSAVSLRDAHCKGSFTIERGTLIRSIPSSSSGYGGVLSGGDNGCG
GKKGTSKSGKRNVPSRVKNYERSRATEESFSPPKPVLSPDPEHLAISRRS
ASISPMKTQVLRRKDAISRGPSSARCTRGDRGRRGSTAKVVETDTASAVT
PSPAAAGSSKSGRSKPIPREASRVTSARGARVKMDLPSCNSMELNASAPS
QRRGKTLAQKKKDEDDDDERNSTTSVLGDVAGATEPGQITCNCKKSKCLK
LYCECFQRRQYCSDCNCKECLNTPRTEDLRQVAIQGTIERNPLAFESKFE
KRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGSNCKCCNCKNYEGAAG
GRKRRAAESLPLRTPPKLAARGRAAATAAAVELATTVVAKDHLAVKGEGR
GFVGDEALGISGSATLRVTEAEMSPDHHVQVGGEDEDDEYFVPPSPLVEA
LRAHPPVQDAPPFYRAASTPDETMDDSGSSSSGSGGGDPLDTPAAGAGTA
AAHNNRSDSNRSDISPAASAVEDFAVAKSVLDMGGTPLQVRRSESAHDTK
FELSVSAASPGGVHALSTRLHQQQQQQEGVPRGGGGGGVEDKAVESAIGM
GSLLSRARREAYEIREKSSAQDNAVIATLDKERAGDGNGGFVANSRGKAG
GQACFTPPTPPPTWDMRQGLDGDAAEGADPDSMPRPCGARDDALLLGVAH
GSSSDVVTAVDPEVNSPSVALAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam