prot_H-elongata_contig74850.15163.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74850.15163.1
Unique Nameprot_H-elongata_contig74850.15163.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
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BLAST of mRNA_H-elongata_contig74850.15163.1 vs. uniprot
Match: A0A6H5JAF9_9PHAE (GH10 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAF9_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 5.250e-11
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:   10 EGSLREAAARCSTARNKRVHVGTAIMPDYLNPHFD 44
            EGSLREAAARC  AR K+VHVG AIMPDYLN H+D
Sbjct:   11 EGSLREAAARCGNARKKKVHVGAAIMPDYLNQHYD 45
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74850.15163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAF9_9PHAE5.250e-1180.00GH10 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74850contigH-elongata_contig74850:2732..2863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74850.15163.1mRNA_H-elongata_contig74850.15163.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74850 2577..2863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74850.15163.1 ID=prot_H-elongata_contig74850.15163.1|Name=mRNA_H-elongata_contig74850.15163.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
MRDVLQEPHEGSLREAAARCSTARNKRVHVGTAIMPDYLNPHFD
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