prot_H-elongata_contig73585.15049.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73585.15049.1
Unique Nameprot_H-elongata_contig73585.15049.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
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BLAST of mRNA_H-elongata_contig73585.15049.1 vs. uniprot
Match: D8LCH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH7_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.060e-28
Identity = 70/100 (70.00%), Postives = 79/100 (79.00%), Query Frame = 0 
Query:    1 KVSRFREGTVRDPALARAECARVFKKAREEWMKAEKGRLQRASNKKAGAMKQAAAHALEPQLAELVKSNRAEARARTEDLDTALLALQTTLERESTEKVR 100
            +V RFREG  RD  +ARAE AR  KKARE WM AEKGRLQR S KKAGA+KQAA  ALEPQL ELVK+NRAEARAR ++L   LL LQ +LERES+EKV+
Sbjct:   92 QVGRFREGRDRDCVVARAESARELKKAREAWMAAEKGRLQRLSEKKAGAIKQAAVRALEPQLTELVKANRAEARARADELGEVLLGLQASLERESSEKVQ 191
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73585.15049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCH7_ECTSI1.060e-2870.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73585contigH-elongata_contig73585:273..909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73585.15049.1mRNA_H-elongata_contig73585.15049.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73585 273..909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73585.15049.1 ID=prot_H-elongata_contig73585.15049.1|Name=mRNA_H-elongata_contig73585.15049.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
KVSRFREGTVRDPALARAECARVFKKAREEWMKAEKGRLQRASNKKAGAM
KQAAAHALEPQLAELVKSNRAEARARTEDLDTALLALQTTLERESTEKVR
SQ
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