prot_H-elongata_contig73562.15046.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73562.15046.1 vs. uniprot
Match: UPI001AD8DC38 (uncharacterized protein LOC121052952 isoform X1 n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8DC38) HSP 1 Score: 53.5 bits (127), Expect = 2.220e-6 Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0
Query: 1 WILDSGATGHFTHDGSKLAGYAE--CSRVLRGVGGEAFPIVGTGSLTLCVRSEGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
WI+DSGA+ H T+D S + S+V GEAFP++GTGS+ L E L++V + P LSHHL+S+ ++
Sbjct: 353 WIIDSGASDHMTYDKSYFTHLSPPPVSKVTN-ANGEAFPVLGTGSVRLTPTLE-------LHNVLYVPALSHHLISVPQL 424
BLAST of mRNA_H-elongata_contig73562.15046.1 vs. uniprot
Match: A0A2P6Q6A6_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6A6_ROSCH) HSP 1 Score: 51.2 bits (121), Expect = 1.510e-5 Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 0
Query: 1 WILDSGATGHFTHDGSKLAGYAE-CSRVLRGVGGEAFPIVGTGSLTLCVRSEGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
WI+DSGA+ H T+D S + + GEAFP++G+GS+ + E L++V + P LSHHL+S+ ++
Sbjct: 14 WIIDSGASDHMTYDKSYFTDLSSPLVSYVTNANGEAFPVLGSGSVCITPTLE-------LHNVLYVPDLSHHLISVPQL 85
BLAST of mRNA_H-elongata_contig73562.15046.1 vs. uniprot
Match: A0A2P6R6I2_ROSCH (Putative RNA-directed DNA polymerase n=3 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R6I2_ROSCH) HSP 1 Score: 51.2 bits (121), Expect = 1.520e-5 Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 1 WILDSGATGHFTHDGSKLAGYAECSR----VLRGVGGEAFPIVGTGSLTLCVRSEGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
WI+DSGA+ H T+D + + E S + GEAFP++GTGS+ + ++L++V + P LSHHL+S+ ++
Sbjct: 120 WIIDSGASDHMTYDKTY---FTELSSPPVSYVTNANGEAFPVLGTGSIRI-------TPTLQLHNVLYVPDLSHHLISVPQL 191
BLAST of mRNA_H-elongata_contig73562.15046.1 vs. uniprot
Match: A0A2P6PGT1_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PGT1_ROSCH) HSP 1 Score: 50.8 bits (120), Expect = 2.000e-5 Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 0
Query: 1 WILDSGATGHFTHDGSKLAGYAECS-RVLRGVGGEAFPIVGTGSLTLCVRSEGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
WI+DSGA+ H T+D S + + GEAFP++G+GS+ + E L++V + P LSHHL+S+ ++
Sbjct: 52 WIIDSGASDHMTYDKSYFTDLSSPPVSYVTNANGEAFPVLGSGSVRITPTLE-------LHNVLYVPDLSHHLISVPQL 123
BLAST of mRNA_H-elongata_contig73562.15046.1 vs. uniprot
Match: R4XGN1_TAPDE (Uncharacterized protein n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XGN1_TAPDE) HSP 1 Score: 50.8 bits (120), Expect = 2.040e-5 Identity = 29/83 (34.94%), Postives = 42/83 (50.60%), Query Frame = 0
Query: 1 WILDSGATGHFTHDGSKLAGYAECSRV-LRGVGGEAFPIVGTGSLTLCVRSEGGVVRVKLNDVAHAPGLSHHLLSLRRIADAG 82
WILDSGAT HFTH LA + + + GG +VG G +T+ + + L+DV + P + +LLS + I G
Sbjct: 456 WILDSGATSHFTHQKDWLADFEDVPHYNVSAAGGHKLTVVGKGKVTI----KSDTFSMTLSDVMYCPQIQENLLSTKGIVSKG 534
BLAST of mRNA_H-elongata_contig73562.15046.1 vs. uniprot
Match: A0A2P6RT72_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RT72_ROSCH) HSP 1 Score: 50.4 bits (119), Expect = 2.830e-5 Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 0
Query: 1 WILDSGATGHFTHDGSKLAGYAECS-RVLRGVGGEAFPIVGTGSLTLCVRSEGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
WI+DSGA+ H T+D S + + GEAFP++G+GS+ + E L++V + P LSHHL+S+ ++
Sbjct: 49 WIIDSGASDHMTYDKSYFTDLSSPPVSYVTNANGEAFPVLGSGSVRVTPTLE-------LHNVLYVPDLSHHLISVPQL 120
BLAST of mRNA_H-elongata_contig73562.15046.1 vs. uniprot
Match: A0A2P6SHX0_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SHX0_ROSCH) HSP 1 Score: 50.1 bits (118), Expect = 3.730e-5 Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 0
Query: 1 WILDSGATGHFTHDGSKLAGYAECS----RVLRGVGGEAFPIVGTGSLTLCVRSEGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
WI+DSGA+ H T+D S + E S + GEAFP++G+GS+ + E L++V + P LSHHL+S+ ++
Sbjct: 14 WIIDSGASDHMTYDKSF---FTELSPPPVSYVTNANGEAFPVLGSGSVRITPTLE-------LHNVLYVPDLSHHLISVPQL 85 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73562.15046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig73562.15046.1 ID=prot_H-elongata_contig73562.15046.1|Name=mRNA_H-elongata_contig73562.15046.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bpback to top |