prot_H-elongata_contig73021.14981.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig73021.14981.1
Unique Name	prot_H-elongata_contig73021.14981.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	267

Homology

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BLAST of mRNA_H-elongata_contig73021.14981.1 vs. uniprot
Match: D7FIW7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW7_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 2.190e-55
Identity = 128/206 (62.14%), Postives = 148/206 (71.84%), Query Frame = 0

Query:   75 DQTLEEEDGDEDTPVAKSLQDLTASANRNREELDDERQLRQLQKDLHEDRKGAAAAARWS-------------ALEEPPPKKSRMEELTTKLGGRAELPTQAVRRITRTIGADGAETVRVSYSLRRQDLVRLDARGGKKQTTVSKVKALRGGTISASPLGFFLPRPQASAEVKAAALQDRAASGGQEE-VLKIRLKTK--TVMAPK 264
            ++TLE  DGD D PVAKSLQDL++S+ +N +ELDDERQ R LQ+DLH  R     AARW              +L     +K++ EEL  +LGGRA+LP QAVRRITRT+G DG ETVRVSYSLRRQDLVRLDARGGKKQT +SK  A  GG   ASPL FFLPRPQASAE KAAA ++R A+ GQEE VLKIRLKT   T +APK
Sbjct: 1294 EETLEGGDGDGDAPVAKSLQDLSSSSQKNTDELDDERQYRMLQQDLHGVR---GEAARWGTGEGSDAAPQGSMSLNVVEARKAQTEELLGQLGGRAQLPAQAVRRITRTVGPDGTETVRVSYSLRRQDLVRLDARGGKKQTALSKSAAASGGVGGASPLSFFLPRPQASAESKAAAYEERGAAAGQEETVLKIRLKTGGLTTVAPK 1496

[Close]

BLAST of mRNA_H-elongata_contig73021.14981.1 vs. uniprot
Match: A0A6H5JVI6_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI6_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 9.810e-55
Identity = 128/209 (61.24%), Postives = 148/209 (70.81%), Query Frame = 0

Query:   75 DQTLEEEDGDEDTPVAKSLQDLTASANRNREELDDERQLRQLQKDLHEDRKGAAAAARWSALEEPPP-------------KKSRMEELTTKLGGRAELPTQAVRRITRTIGADGAETVRVSYSLRRQDLVRLDARGGKKQTTVSKVKALRGGTISASPLGFFLPRPQASAEVKAAALQDRAASGGQEE-VLKIRLKTKTV--MAPKDGK 267
            ++TLE  DGD D PVAKSLQDL++S+ +N +ELDDERQ R LQ+DLH  R     AARW   E P               +K++ EEL  +LGGRA+LP QAVRRITRT+G DG ETVRVSYSLRRQDLVRLDAR GKKQT +SK  A  GG   ASPL FFLPRPQASAE KAAA ++R A+ GQEE VLKIRLKT  +   APK+ K
Sbjct:  508 EETLEGGDGDGDAPVAKSLQDLSSSSQKNTDELDDERQYRMLQQDLHGVR---GEAARWGTGEGPDAAPQGSMSLNVVEARKAQTEELLGQLGGRAQLPAQAVRRITRTVGPDGTETVRVSYSLRRQDLVRLDARVGKKQTALSKSAAASGGVGGASPLSFFLPRPQASAESKAAAYEERGAAAGQEETVLKIRLKTGGLPTAAPKENK 713

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig73021.14981.1 vs. uniprot

BLAST of mRNA_H-elongata_contig73021.14981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FIW7_ECTSI	2.190e-55	62.14	Bromo domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JVI6_9PHAE	9.810e-55	61.24	Bromo domain-containing protein n=1 Tax=Ectocarpus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig73021	contig	H-elongata_contig73021:268..3126 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig73021.14981.1	mRNA_H-elongata_contig73021.14981.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig73021 247..3126 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig73021.14981.1 ID=prot_H-elongata_contig73021.14981.1|Name=mRNA_H-elongata_contig73021.14981.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp
MKSKARGVISSDGNSDGGGGGTGAASMEEEDDAHDLSDDEDDDDDLNEDD
LMSDIEEVRGAGRRRNDVNSMFIRDQTLEEEDGDEDTPVAKSLQDLTASA
NRNREELDDERQLRQLQKDLHEDRKGAAAAARWSALEEPPPKKSRMEELT
TKLGGRAELPTQAVRRITRTIGADGAETVRVSYSLRRQDLVRLDARGGKK
QTTVSKVKALRGGTISASPLGFFLPRPQASAEVKAAALQDRAASGGQEEV
LKIRLKTKTVMAPKDGK