prot_H-elongata_contig72677.14939.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72677.14939.1
Unique Nameprot_H-elongata_contig72677.14939.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig72677.14939.1 vs. uniprot
Match: D7G861_ECTSI (ADP-ribosylation factor GTPase-activating protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G861_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.220e-17
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    1 GQALRLGVREGCTVVGINGEEYLSHAHTVATLKHAKRPIAVRFRPPES 48
            GQA+ LGVREGC VVGINGE+YLSHAHTVATLKHA+RP+ VRFR P++
Sbjct: 1015 GQAVSLGVREGCKVVGINGEKYLSHAHTVATLKHARRPVVVRFRLPDA 1062          
BLAST of mRNA_H-elongata_contig72677.14939.1 vs. uniprot
Match: W7TXK3_9STRA (Adp-ribosylation factor gtpase-activating (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXK3_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 9.940e-14
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 GQALRLGVREGCTVVGINGEEYLSHAHTVATLKHAKRPIAVRFRPPES 48
            G A   GVR+GC VVG+NGE ++SHAHTVATLKH KRP+ VRFR P S
Sbjct:  388 GAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLPTS 435          
BLAST of mRNA_H-elongata_contig72677.14939.1 vs. uniprot
Match: A0A4D9D4X6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4X6_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.650e-13
Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 GQALRLGVREGCTVVGINGEEYLSHAHTVATLKHAKRPIAVRFRPP 46
            G A   GVR+GC VVG+NGE ++SHAHTVATLKH KRP+ VRFR P
Sbjct:  964 GAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLP 1009          
BLAST of mRNA_H-elongata_contig72677.14939.1 vs. uniprot
Match: A0A7S2XZL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.470e-12
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 GQALRLGVREGCTVVGINGEEYLSHAHTVATLKHAKRPIAVRFR 44
            GQA + GV  G T++G+NGE++LSHAHTV+TLKH KRPI+VR R
Sbjct:  115 GQADKQGVEVGSTIIGLNGEQFLSHAHTVSTLKHGKRPISVRLR 158          
BLAST of mRNA_H-elongata_contig72677.14939.1 vs. uniprot
Match: A0A835ZHI9_9STRA (PDZ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHI9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 6.330e-12
Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 GQALRLGVREGCTVVGINGEEYLSHAHTVATLKHAKRPIAVRFR 44
            GQA   GV+ GC +VG+NGE+YL HAH VA LKH +RP+ VR R
Sbjct:   31 GQAHGQGVQTGCVMVGVNGEQYLGHAHAVAALKHGRRPVTVRLR 74          
BLAST of mRNA_H-elongata_contig72677.14939.1 vs. uniprot
Match: A0A8J2SXS4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXS4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.550e-10
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 GQALRLGVREGCTVVGINGEEYLSHAHTVATLKHAKRPIAVRFR 44
            GQA   GVR G  V+G+NGE YLSHAHT ATLKH +RP+ +R R
Sbjct:  499 GQAAAAGVRAGDVVLGVNGERYLSHAHTAATLKHGRRPVELRLR 542          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72677.14939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G861_ECTSI1.220e-1779.17ADP-ribosylation factor GTPase-activating protein,... [more]
W7TXK3_9STRA9.940e-1468.75Adp-ribosylation factor gtpase-activating (Fragmen... [more]
A0A4D9D4X6_9STRA2.650e-1369.57Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2XZL0_9STRA2.470e-1265.91Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZHI9_9STRA6.330e-1261.36PDZ domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A8J2SXS4_9STRA2.550e-1063.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72677contigH-elongata_contig72677:198..350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72677.14939.1mRNA_H-elongata_contig72677.14939.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72677 198..350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72677.14939.1 ID=prot_H-elongata_contig72677.14939.1|Name=mRNA_H-elongata_contig72677.14939.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
GQALRLGVREGCTVVGINGEEYLSHAHTVATLKHAKRPIAVRFRPPESRR
*
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