prot_H-elongata_contig72010.14878.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72010.14878.1
Unique Nameprot_H-elongata_contig72010.14878.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length405
Homology
BLAST of mRNA_H-elongata_contig72010.14878.1 vs. uniprot
Match: A0A6H5J5M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5M4_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.670e-14
Identity = 97/298 (32.55%), Postives = 135/298 (45.30%), Query Frame = 0
Query:    1 TAEESLFDDLEVKPPTSKAASSSAFGNEGSTDSGGDGGAFSAFQFMAIAPSAIPAPASAPRDPAAGDFAAAPTATTDQGPKNMSEGMSAFSFLLGAPPAEGDVGVEVQARDERNKEKNAVPGSSSAGA--SSFSFLSEGGSSSKSTF--LAPQASPHTPENGVHPVTCEGRGEIP------QTEKVDGVGVDDPAGGGAAGTIGSSGSSTLGVKTNIEESSSPVFNGVSVGGPSASALM---GVGSEKAGEEVGSKASGVSGAGIEAVTPSRKPSTSVVRKKRTARRVGYGRDESLAT 285
            +AEESLFDDLEVKPP  +   S     +   DS    G FSAFQFMA              +PAA    A P   +        +GMSAFSFL    PA G+ G       E   E  ++PG ++     SSFSFLSEGG    +T   +A +A+P    +   P+   G   +P      ++ +V G+    P      G +    + + G+ +++   S+        GG +A+A     G   + A ++V                PS KPS  VVRKKR  RRVGY R+E+LA+
Sbjct:   67 SAEESLFDDLEVKPPAVEPKPSPM---KPPADSESAAGVFSAFQFMA--------------EPAAASDKATPVGGSPPSAGGGGQGMSAFSFLTEESPAAGESG-------EGQDETVSIPGDAAGKTTPSSFSFLSEGGGGGPATESRVAAEAAPSLVSSS-SPLAATGNVVLPAPSDGKESAEVGGIAGQTP------GDVDQQPAVSSGLASDVSSPSASSSTTAQAGGLAATATAAQEGADKQPAADDV----------------PSWKPSAGVVRKKRAVRRVGYAREETLAS 317          
BLAST of mRNA_H-elongata_contig72010.14878.1 vs. uniprot
Match: D7FWK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK2_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 5.340e-13
Identity = 121/383 (31.59%), Postives = 160/383 (41.78%), Query Frame = 0
Query:   38 GAFSAFQFMAIAPSAIPAPASAPRDPAAGDFAAAPTATTDQGPKNMSEGMSAFSFLLGAPPAEGDVGVEVQARDERNKEKNAVPGSSSAGA---SSFSFLSEGGSSSKSTFLAPQASPHTPENGVH-PVTCEGRGEIPQTEKVDGVGVDDPAGGGAAGTIGSSGSSTLGVKTNIEESSSPVFNGVSVGG---------PSASALMGVGSEKAGEEVGSKASGVSGAGIEAVTPSRKPSTSVVRKKRTARRVGYGRDESLATLA--------GTSGERSSSGGGGVASAANSGAMKSGEESLPSPSSLTAISSIGGGISYVSQEGSGGKLSEVSPSSSVVHRNNSGEASMDDSDVTEAVAMAALAASMAPEHIHRSIAKGDIKQ 399
            G FSAFQFMA              +PAA    AAP   +         GMSAFSFL    PA G+    V+ +DE       +P   +AG    SSFSFLSEG                        P+   G+ E+P +           A G   G +    + + G+ + +   S+         G             A  G   + A ++V                PS KPS SVVRKKR  RRVGY R+E+LA+ +         T+G ++   GGG AS   +G   SG  S PS ++   +S  GGG           +    SP ++       G  +MDDS V EA AMAALAASMAP  I  ++AKGD+KQ
Sbjct:   20 GVFSAFQFMA--------------EPAAPSDKAAPIGGSPPSAGGGGPGMSAFSFLTDESPAAGN---SVEGQDETVS----IPAGDAAGRTTPSSFSFLSEGXXXXXXXXXXXXXXXXXXXXXXSSPLAATGKAELPASSDGKAAAEFGGAAGQTPGDVDQQPAGSSGLASEVSSPSASSSTTARADGLXXXXXXXXXXXXAQEGAEKKPAADDV----------------PSWKPSASVVRKKRAVRRVGYAREETLASSSMAPPVPRSPTAGRQA---GGGNASTEAAGDQTSG--STPSATAXXGLSRGGGGDYEAPSVPIPSRKVTTSPMTA-------GREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGDLKQ 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72010.14878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5M4_9PHAE3.670e-1432.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FWK2_ECTSI5.340e-1331.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72010contigH-elongata_contig72010:1494..3157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72010.14878.1mRNA_H-elongata_contig72010.14878.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72010 1494..3157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72010.14878.1 ID=prot_H-elongata_contig72010.14878.1|Name=mRNA_H-elongata_contig72010.14878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=405bp
TAEESLFDDLEVKPPTSKAASSSAFGNEGSTDSGGDGGAFSAFQFMAIAP
SAIPAPASAPRDPAAGDFAAAPTATTDQGPKNMSEGMSAFSFLLGAPPAE
GDVGVEVQARDERNKEKNAVPGSSSAGASSFSFLSEGGSSSKSTFLAPQA
SPHTPENGVHPVTCEGRGEIPQTEKVDGVGVDDPAGGGAAGTIGSSGSST
LGVKTNIEESSSPVFNGVSVGGPSASALMGVGSEKAGEEVGSKASGVSGA
GIEAVTPSRKPSTSVVRKKRTARRVGYGRDESLATLAGTSGERSSSGGGG
VASAANSGAMKSGEESLPSPSSLTAISSIGGGISYVSQEGSGGKLSEVSP
SSSVVHRNNSGEASMDDSDVTEAVAMAALAASMAPEHIHRSIAKGDIKQV
RAEP*
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