prot_H-elongata_contig71343.14794.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71343.14794.1
Unique Nameprot_H-elongata_contig71343.14794.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length184
Homology
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: D8LKK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK4_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 7.950e-83
Identity = 120/150 (80.00%), Postives = 136/150 (90.67%), Query Frame = 0
Query:    1 MANFEGGMPEPYIPPNKNTIFVRPPEALRTLDVSRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERLAKEKADREASA 150
            MANFE GMP PYIPP+KN+++VRP EALR +DVS+L+V+WPNNVDST+TIK+GRRIPKAS CPSPTVEDMSQ+L FLQLWHAVEPYKAYPRE WVLGRVRVRL DEDGVPWNPEVPDR +LMKKMGEL+PNLKSR +R++K K D EA A
Sbjct:   25 MANFEDGMPTPYIPPDKNSLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALA 174          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: A0A836CKP4_9STRA (Signal recognition particle, SRP19 subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP4_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.620e-33
Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = 0
Query:    1 MANFEGGMPEPYIPPNKNTIFVRPPEALRTLDVSRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERL 139
            M + E    E   PP+K   ++ P + +  +D S+ +VVWPN +D  KTI +GRR+ K  AC  P V ++  +     LW+A+EP+K YPRE +VLGRVRVR+   DG P +P++PD+  L+KKMG LIPNL  R++RL
Sbjct:    5 MKSMEDEQQELPPPPDKTLSYLWPDD-MGEVDASKWIVVWPNYIDKAKTIAQGRRVAKEFACDIPIVIELGAICQAFNLWYALEPFKGYPREPYVLGRVRVRVTMPDGTPAHPDIPDKVALLKKMGTLIPNLHIRKDRL 142          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: A0A7S2B120_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B120_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.310e-33
Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = 0
Query:   15 PNKNTIFVRPPEALRTLDVSRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERL 139
            PN NT    PP     LD ++ + VWP+N++S +T+ KGRR+P + +C  P V +MS++L F +L H +EPYK YPR+    GRV+V+L DED  P + EVP R  LM KMGELIP LK R +R+
Sbjct:   37 PNPNTKISWPPSMAGKLDDAKFICVWPSNINSKRTLAKGRRVPISHSCEDPIVAEMSEVLQFYKLNHVIEPYKCYPRDWTYPGRVKVKLFDEDDQPCSEEVPSRRVLMMKMGELIPKLKIRNKRM 161          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: A0A6V2W292_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2W292_HETAK)

HSP 1 Score: 122 bits (307), Expect = 3.340e-31
Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = 0
Query:   32 DVSRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERL 139
            D SR + +WPNN++S KT+K+GRRI K  AC  P VEDMS++  +LQL H  +PYK YPR+    GR+ VRL  EDG P+NP+VP R  L+ +MG LIP L +R+ RL
Sbjct:  107 DYSRFITLWPNNLNSKKTVKQGRRIGKEQACEDPIVEDMSEVCQYLQLHHVKQPYKGYPRDWLCQGRLLVRLTREDGTPYNPKVPTRRALLVEMGRLIPKLSNRQRRL 214          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: A0A8J5IME7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IME7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.160e-30
Identity = 55/109 (50.46%), Postives = 80/109 (73.39%), Query Frame = 0
Query:   34 SRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERLAKE 142
            S  +  +PN +D+ KT+++GRRIPK +AC +P  ++MS++  + +L H +EP K YPR+  V GR+RVRL+ +DG P NP++P+R TLM KM ELIP L+SR+ RL KE
Sbjct:   54 SSFMTFYPNYIDNKKTVQQGRRIPKQNACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLVRDDGSPENPDIPNRKTLMIKMAELIPKLQSRKVRLEKE 162          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: A0A7S2SLH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLH7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 8.700e-30
Identity = 61/128 (47.66%), Postives = 83/128 (64.84%), Query Frame = 0
Query:   13 IPPNKNTIFVRPPEALRTLDVSRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERLA 140
            + P+ NT    P      +D SR LV+W  N++ +  + +GRRIP ASAC  P V +MS++L   +L H +EP+K YPR   V GRVRV+L+D++  P NPEVP R  LM +MGELIP LK R +R+A
Sbjct:   36 VAPDPNTKITWPQSLAGKIDDSRFLVIWTININRSFKLSEGRRIPIASACEDPIVAEMSEVLQHFKLTHVIEPFKVYPRVM-VPGRVRVKLIDDEDQPCNPEVPTRRVLMMRMGELIPKLKIRSQRIA 162          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: D0MUF1_PHYIT (Transmembrane protein, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MUF1_PHYIT)

HSP 1 Score: 117 bits (293), Expect = 5.160e-29
Identity = 56/109 (51.38%), Postives = 78/109 (71.56%), Query Frame = 0
Query:   34 SRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERLAKE 142
            S  +  +PN +D  KT+++GRRIPK SAC +P  ++MS++  + +L H +EP K YPR+  V GR+RVRLL +DG P N ++P+R TLM KM ELIP L+SR+ RL KE
Sbjct:  129 STFMTFYPNYIDDKKTVQQGRRIPKLSACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLLRDDGTPENADIPNRKTLMIKMAELIPKLQSRKVRLEKE 237          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: M4BW27_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW27_HYAAE)

HSP 1 Score: 112 bits (280), Expect = 7.110e-28
Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 0
Query:   34 SRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERLAKE 142
            S     +PN +DS +T+++GRRIPK+ AC +P  ++MS++  FL+L H +EP K YPR+  V GR+RVRL+ EDG   NPE+P+R  L+ KM +LIP L+SR+ RL KE
Sbjct:   52 SMFYTFYPNYLDSKRTVQQGRRIPKSMACEAPIADEMSEVCTFLKLPHVLEPTKKYPRDWLVAGRIRVRLVREDGSLENPELPNRKALILKMADLIPKLQSRKVRLEKE 160          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: A0A6A3TTV6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TTV6_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.020e-27
Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 0
Query:   36 LLVVWPNNVDSTKTIKKGRRIPKASA--CPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERLAKE 142
            L+  +PN +DS KT+++GRRIP+A A  C +P  ++MS++  +L+L H +EP K YPR+  V GRVRVRL+ +DG P NPEVP R  LM KM ELIP L+SR+ RL +E
Sbjct:  124 LMTFYPNYIDSKKTVQQGRRIPQAQAQACETPLADEMSEVCTYLKLPHVLEPAKKYPRDWLVSGRVRVRLVRDDGSPENPEVPTRKALMVKMAELIPKLQSRKLRLERE 232          
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Match: A0A225WA95_9STRA (Transmembrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WA95_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.210e-27
Identity = 54/109 (49.54%), Postives = 76/109 (69.72%), Query Frame = 0
Query:   34 SRLLVVWPNNVDSTKTIKKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVRVRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERLAKE 142
            S     +PN +D+ KT+++GRRIP+  AC  P  ++MS++  + +L H +EP K YPR+  V GR+RVRL+ +DG P N E+P+R TLM KM ELIP L+SR+ RL KE
Sbjct:  132 STFFTFYPNYIDNKKTVQQGRRIPQEKACEKPIADEMSEVCTYFKLPHVLEPSKKYPRDWLVSGRIRVRLVRDDGTPENAEIPNRKTLMVKMAELIPKLQSRKVRLEKE 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71343.14794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKK4_ECTSI7.950e-8380.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKP4_9STRA3.620e-3345.32Signal recognition particle, SRP19 subunit n=1 Tax... [more]
A0A7S2B120_9STRA6.310e-3348.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2W292_HETAK3.340e-3153.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J5IME7_9STRA6.160e-3050.46Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A7S2SLH7_9STRA8.700e-3047.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D0MUF1_PHYIT5.160e-2951.38Transmembrane protein, putative n=13 Tax=Phytophth... [more]
M4BW27_HYAAE7.110e-2850.46Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6A3TTV6_9STRA1.020e-2753.21Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A225WA95_9STRA1.210e-2749.54Transmembrane protein n=1 Tax=Phytophthora megakar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 182..183
NoneNo IPR availablePANTHERPTHR17453:SF0SIGNAL RECOGNITION PARTICLE 19 KDA PROTEINcoord: 33..181
IPR036521Signal recognition particle, subunit SRP19-like superfamilyGENE3D3.30.56.30coord: 26..145
e-value: 2.7E-30
score: 107.2
IPR036521Signal recognition particle, subunit SRP19-like superfamilySUPERFAMILY69695SRP19coord: 29..134
IPR002778Signal recognition particle, SRP19 subunitPFAMPF01922SRP19coord: 38..131
e-value: 6.5E-23
score: 81.5
IPR002778Signal recognition particle, SRP19 subunitPANTHERPTHR17453SIGNAL RECOGNITION PARTICLE 19 KD PROTEINcoord: 33..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71343contigH-elongata_contig71343:494..3008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71343.14794.1mRNA_H-elongata_contig71343.14794.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71343 494..3014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71343.14794.1 ID=prot_H-elongata_contig71343.14794.1|Name=mRNA_H-elongata_contig71343.14794.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
MANFEGGMPEPYIPPNKNTIFVRPPEALRTLDVSRLLVVWPNNVDSTKTI
KKGRRIPKASACPSPTVEDMSQLLVFLQLWHAVEPYKAYPREQWVLGRVR
VRLLDEDGVPWNPEVPDRSTLMKKMGELIPNLKSRRERLAKEKADREASA
RAEKERAAAAAAAAAAAASQTNLKKKGKKKGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036521SRP19-like_sf
IPR002778Signal_recog_particle_SRP19