prot_H-elongata_contig71261.14787.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71261.14787.1
Unique Nameprot_H-elongata_contig71261.14787.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length146
Homology
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BLAST of mRNA_H-elongata_contig71261.14787.1 vs. uniprot
Match: A0A8J2QTV3_9NEOP ((African queen) hypothetical protein n=1 Tax=Danaus chrysippus TaxID=151541 RepID=A0A8J2QTV3_9NEOP)

HSP 1 Score: 70.1 bits (170), Expect = 3.190e-11
Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 0 
Query:    1 MAITAHYIKEGDTEVSVTTMSCVECPPSHTAENLAKAAKDCMENYEISESAITFMTDTASNIKKAGCQLLQQEWHGCAAHVIELSIKPILNEPS-----------IKATLAKHNKVVTHLHASTKSRDKLREFQK 124
            +++TAHYI +   +  V  +S  E    HTAEN+A A +D M+ +EIS   +T +TD A+ +KKA  + L +  H C AH + L++K  L + +           ++  L K   +V+H   STK+   L + Q+
Sbjct:  200 ISLTAHYIYQYKLKSVV--ISTSEIQLHHTAENIAMAIQDVMDQWEISSKVVTIVTDNAAAMKKAVSECLNKRNHFCVAHTLNLAVKDCLEKETFDLAGNTSNCQLQQLLGKCRAIVSHFKHSTKASYALLKMQE 332
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BLAST of mRNA_H-elongata_contig71261.14787.1 vs. uniprot
Match: UPI00084E62C0 (zinc finger BED domain-containing protein 1-like n=2 Tax=Trachymyrmex zeteki TaxID=64791 RepID=UPI00084E62C0)

HSP 1 Score: 57.4 bits (137), Expect = 8.380e-7
Identity = 37/134 (27.61%), Postives = 68/134 (50.75%), Query Frame = 0 
Query:    2 AITAHYIKEGDTEVSVTTMSCVECPPSHTAENLAKAAKDCMENYEISESAITFMTDTASNIKKAGCQLLQQEWHGCAAHVIELSIKPILNEPSIKATLAKHNKVVTHLHASTKSRDKLREFQKVSLPSPFLRIR 135
            AITAHY+ +   ++    + C+     HTAEN+++  KDC++N+ + +  I  +TD A+N + A  +L       C  H + L ++  L E  I     K   +V +   S+ +  KL+  Q+  +  P L+++
Sbjct:  243 AITAHYL-DSKFQLKSILLECLSFHSRHTAENISRCLKDCVQNFNLEDKIICCVTDNAAN-EVAAIRLCNWRHLPCFVHSLNLVVQQSLKE--ISNVTVKVKSIVEYFERSSYALSKLQSMQE-QMKLPKLKLK 371
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BLAST of mRNA_H-elongata_contig71261.14787.1 vs. uniprot
Match: A0A8C5PB87_9ANUR (Uncharacterized protein n=6 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PB87_9ANUR)

HSP 1 Score: 53.5 bits (127), Expect = 1.840e-5
Identity = 32/127 (25.20%), Postives = 59/127 (46.46%), Query Frame = 0 
Query:    1 MAITAHYIKEGDTEVSVTTMSCVECP---PSHTAENLAKAAKDCMENYEISESAITFMTDTASNIKKAGCQLLQQEWHGCAAHVIELSIKPILN-EPSIKATLAKHNKVVTHLHASTKSRDKLREFQ 123
            + +T HYI E    +    +S V        HTA   ++   +    +   E  I F T   +N      ++L  +WHGCAAH+++L+I   L+ + ++K  +   + +    H+ST  +  L ++Q
Sbjct:  197 LVLTIHYISESSWVMQSRCLSVVNLENLEADHTARKTSEIISNEFAKHGFGEEKILFATTDTTNTMPCTAKILDIQWHGCAAHILQLTINAALDVQRTVKNLIGCLHYIAGFFHSSTVGQAVLTKYQ 323
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71261.14787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A8J2QTV3_9NEOP3.190e-1132.59(African queen) hypothetical protein n=1 Tax=Danau... [more]
UPI00084E62C08.380e-727.61zinc finger BED domain-containing protein 1-like n... [more]
A0A8C5PB87_9ANUR1.840e-525.20Uncharacterized protein n=6 Tax=Leptobrachium leis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 1..124
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 1..124
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71261contigH-elongata_contig71261:364..801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71261.14787.1mRNA_H-elongata_contig71261.14787.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71261 361..801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71261.14787.1 ID=prot_H-elongata_contig71261.14787.1|Name=mRNA_H-elongata_contig71261.14787.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MAITAHYIKEGDTEVSVTTMSCVECPPSHTAENLAKAAKDCMENYEISES
AITFMTDTASNIKKAGCQLLQQEWHGCAAHVIELSIKPILNEPSIKATLA
KHNKVVTHLHASTKSRDKLREFQKVSLPSPFLRIRACIDAARQLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf