prot_H-elongata_contig7001.14651.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7001.14651.1
Unique Nameprot_H-elongata_contig7001.14651.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1198
Homology
BLAST of mRNA_H-elongata_contig7001.14651.1 vs. uniprot
Match: A0A6H5J6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H7_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 3.140e-24
Identity = 169/472 (35.81%), Postives = 206/472 (43.64%), Query Frame = 0
Query:  760 KHSGLGRRDQPLAKKVTMPIVGGRAAWDKFLADAVAEEREDKGDDEAESAFHGNEGGESKA-----------LLSSKREEGDESTAAADPDREEEXXXXVELVELIERAPRGFKNPVH-MAGPNKGPAGAFSGNSMWRLTNSAASTANRAQSGLETNGDGGFSNPLAAIRAGSARVVSEGGPGAAARGGTSVNPLAGLRGAANMSGAGIANPLARGGSFRRPAXXGXXXXXXXXXXXXATGIAVAAGRENPGVDARRRTIGTVGG-RLSDGGVNGAAPVAASASNIMKHAEKSLRVSHFT--PLTSS-------------FALAPASLSLDXXXXXXXXXXXXXXXXXXXXXXXXXPSTKAIH-----PSSFMDGALNGSSFRPNGRPPPSHRSRRGVALRENVLQHEADRDPGQTKVASAVMAFQKMGNPRVGVAIQDPHQVEVST-------VAEQGLVQLRRVNWSPHP 1191
            + S LGR   P  K VTMPI GGRAAW+KFLA         +G+ E  +A    +GG ++                   +   + AA   +             L  +  RGF NP     GPNKGPAGAFSGNSMWRL    A+   RA+SG+  NG GG+SNPLAA+RA  +                  NPLAGLRGAA      ++NPLAR    R P   G            A G+A    R   G D      GTVGG  L    V      A       +  E SL     T  PL+SS              +  P+  S D   XXXXXXXXXXXXXXXXXXXXXX            P+ F     NGS        PP    RR  A R        +RDPGQ KV   V A Q+    R+ + +Q+ H  ++S        + E+ LVQLRR  +SP P
Sbjct: 1369 RSSALGRPGMPSVK-VTMPIAGGRAAWNKFLATTA------QGESEESAAAADGDGGRAEKEGXXXXXXXXXXXXXXXPKASNAVAAGSGNH---------AATLAAKGLRGFTNPAQSQEGPNKGPAGAFSGNSMWRLAGGTAAETGRARSGVAANGHGGYSNPLAAMRAAGSGXXXXXXXXXXXXXXXGSNPLAGLRGAAXXXXXRVSNPLARS---RGPRAGGSR----------AGGVANPMLRSGGGGDVGGLARGTVGGVPLFSSSVRTTGRTAPXX-XXXRDDEGSLSPGPATMPPLSSSPTEMGGAPAIPVAMSWGPSPSSADTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERPPTEFRAIGSNGSWPTDGALVPP----RRRAAARGAQPHSVTERDPGQEKVGGLVKALQQPDASRLRLLLQNTHNPDLSASGSSLSNLGEKRLVQLRRAKYSPRP 1806          
BLAST of mRNA_H-elongata_contig7001.14651.1 vs. uniprot
Match: D8LC53_ECTSI (Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC53_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 3.130e-18
Identity = 137/367 (37.33%), Postives = 167/367 (45.50%), Query Frame = 0
Query:  853 LIERAPRGFKNPVH-MAGPNKGPAGAFSGNSMWRLTNSAASTANRAQSGLETNGDGGFSNPLAAIRAGSARVVSEGGPGAAARGGTSVNPLAGLRGAANMSGAGIANPLARGGSFRRPAXX--GXXXXXXXXXXXXATGIAVAAGRENPGVDARRRTIGTVG-------------GRLSDGGVNGAAPVAASASNIMKHAEKSLRVSHFTPLTSSFALAPASLSLDXXXXXXXXXXXXXXXXXXXXXXXXXPSTKAIH-----PSSFMDGALNGSSFRPNGRPPPSHRSRRGVALRENVLQHEADRDPGQTKVASAVMAFQKMGNPRVGVAIQDPHQVEVST-------VAEQGLVQLRRVNWSPHP 1191
            L  + PRGF NP     GPNKGPAGAFSGNSMWRL    A+ A            GG+SNPLAA+RA  +             G    NPLAGLRGAA+M  AG++NPLARG   R       G              G+A   G    GV +   ++GT G             G LS G      P  +S+   M  A          P   S+  +P+S    XXXXXXXXXXXXXXXXXXXXXXXXX            P+ F     NGS        PP    RR  A R        +RDPGQ KV   V A Q+     + + + + H  ++S        + E+GLV+LRR  +SP P
Sbjct: 1369 LAAKGPRGFTNPAQSQEGPNKGPAGAFSGNSMWRLAGGTAAGAXXXXXXXXXXXHGGYSNPLAAMRAAGSGXXXXXXXXXXXAGXXVANPLAGLRGAASMXXAGVSNPLARGRGVRAGGSIAGGMANPMLRSGGGDMGGLARGIGG---GVPSFSSSVGTTGRTAPXXXXXRDDEGSLSPGPAT--MPPLSSSPTEMGRAPA-------IPAAMSWGPSPSSADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERPPTEFRAIGSNGSWPTDGALVPP----RRRAASRGAQPHSMTERDPGQEKVGGLVKALQQPDASGLRLLLHNRHNPDLSASGSSLSNLGEKGLVKLRRAKYSPRP 1719          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7001.14651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J6H7_9PHAE3.140e-2435.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LC53_ECTSI3.130e-1837.33Ankyrin domain protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 579..606
NoneNo IPR availableCOILSCoilCoilcoord: 703..723

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7001contigH-elongata_contig7001:3506..8798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7001.14651.1mRNA_H-elongata_contig7001.14651.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7001 612..8954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7001.14651.1 ID=prot_H-elongata_contig7001.14651.1|Name=mRNA_H-elongata_contig7001.14651.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1198bp
MLSAVTSTARGTPWNARPPPGITETKRPTRGRSSHLVEGGVTSQEGGLLS
SSALAAVAVGIGEATSEAKSSAPKVGVDEVKVVLPRARTPRAVNVPRQPL
VTFKTPLREIRGQAKTNTEAVGKKGGGDGQGTQPKLPPRRSGANQALTPP
TWASELDVGIAKRLPHRTKVFESPLPVRRSTAYRPYRINSPSPRLTGGGA
AVRVKASSKKEGFFPLGASHPAAPTRTLASSRRIKEDTLLDAAADSSTRP
IVALKYSRKASVTGGAGAGTVLGATPSSKERMDGEDDGPPGIDALHSWLS
AAKAEAGASVGVEVIFRSEGGTPIRMTSWSTSPSRASIERAAAADSQGAV
VFSDSETDNERSSSVGGQTSAASTTFGDLGSLPVPPAPPSVKAASGLRSG
AGTTISDEDVEIAMEKSVEDATSSLVYHSSVGLQAADSTSLSSPGDGSKA
ASTAVSFPSPLNEPGIAKSLSWYRSRDGPGSISTSQGWGPDVPAAATEVE
VEEGVDAMVEAEANVEVEMERKANPEVEPKANLEVEMEPKANLEKDLKVE
EDLKVEEDLKVEEDLKVEEKVKAEEEVFLEEEVTAEEEVTAEIEEVTAEI
EEVTAEIEEPRTINGGGSPRSSETALTLKVSDDLVANLGGSEAPPSCLPA
AASSKYGSSEIGVSSFEPNPASSTSPSPPPPGRAGEPTNIVDILEEAVSW
LYEEEKEEEEEATMETKEEVDDEPRPAPLMNSSVASPRKPSKSMTNLSLL
SPNPPVMSRKHSGLGRRDQPLAKKVTMPIVGGRAAWDKFLADAVAEERED
KGDDEAESAFHGNEGGESKALLSSKREEGDESTAAADPDREEEEEEEVEL
VELIERAPRGFKNPVHMAGPNKGPAGAFSGNSMWRLTNSAASTANRAQSG
LETNGDGGFSNPLAAIRAGSARVVSEGGPGAAARGGTSVNPLAGLRGAAN
MSGAGIANPLARGGSFRRPAAGGAGTGTANPLARRATGIAVAAGRENPGV
DARRRTIGTVGGRLSDGGVNGAAPVAASASNIMKHAEKSLRVSHFTPLTS
SFALAPASLSLDDDATSDGGGGGKLTAGEGVGAGAGAPSTKAIHPSSFMD
GALNGSSFRPNGRPPPSHRSRRGVALRENVLQHEADRDPGQTKVASAVMA
FQKMGNPRVGVAIQDPHQVEVSTVAEQGLVQLRRVNWSPHPVETNGA*
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