prot_H-elongata_contig69639.14613.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig69639.14613.1
Unique Name	prot_H-elongata_contig69639.14613.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	126

Homology

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: A0A2J6LJW1_LACSA (Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LJW1_LACSA)

HSP 1 Score: 204 bits (519), Expect = 1.160e-65
Identity = 104/118 (88.14%), Postives = 109/118 (92.37%), Query Frame = 0

Query:    8 HNYFSSELFSTLPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            H++F    F +    MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   26 HHHFHLHFFESTKFQMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 143

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.630e-65
Identity = 107/120 (89.17%), Postives = 112/120 (93.33%), Query Frame = 0

Query:    6 LSHNYFSSELFSTLPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            ++H + SS   ++   NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    9 MAHKFVSSNKPTS---NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: UPI001C056972 (histone H4-like n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C056972)

HSP 1 Score: 203 bits (516), Expect = 3.020e-65
Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0

Query:   17 STLPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            S L RNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   32 SFLNRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 140

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: UPI0008738E0C (histone H4-like n=1 Tax=Lates calcarifer TaxID=8187 RepID=UPI0008738E0C)

HSP 1 Score: 202 bits (514), Expect = 4.690e-65
Identity = 104/115 (90.43%), Postives = 109/115 (94.78%), Query Frame = 0

Query:   11 FSSELFSTLPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            FS ++  + P  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   18 FSCDISFSDPNKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 132

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: A0A6J1VXA0_9SAUR (Histone H4 n=1 Tax=Notechis scutatus TaxID=8663 RepID=A0A6J1VXA0_9SAUR)

HSP 1 Score: 201 bits (512), Expect = 8.870e-65
Identity = 104/117 (88.89%), Postives = 112/117 (95.73%), Query Frame = 0

Query:    9 NYFSSELFSTLPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            ++ +SE+   + R+MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   14 SFAASEVGWYVKRSMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 130

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: UPI0013020A52 (uncharacterized protein LOC100916825 n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=UPI0013020A52)

HSP 1 Score: 204 bits (520), Expect = 1.090e-64
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0

Query:   18 TLPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            TLP NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:  116 TLPVNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 223

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: A0A6G1SJU5_9ACAR (Histone H4 (Fragment) n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SJU5_9ACAR)

HSP 1 Score: 201 bits (511), Expect = 1.640e-64
Identity = 106/122 (86.89%), Postives = 112/122 (91.80%), Query Frame = 0

Query:    8 HNYFSSELFSTLPR----NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            H+Y+  +L + L      NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   17 HSYYYLQLRTPLQLQNKFNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 138

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: A0A453MXZ5_AEGTS (Histone H4 n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453MXZ5_AEGTS)

HSP 1 Score: 201 bits (510), Expect = 1.790e-64
Identity = 106/122 (86.89%), Postives = 110/122 (90.16%), Query Frame = 0

Query:    4 SILSHNYFSSELFSTLPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            SI S+    S   +  P  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    9 SIRSNLLARSSKEAVSPSTMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130

[Close]

BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: A0A1J3ENA7_NOCCA (Histone H4 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ENA7_NOCCA)

HSP 1 Score: 201 bits (510), Expect = 1.790e-64
Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 0

Query:   19 LPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
             P  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   24 FPEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130

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BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Match: W7TR01_9STRA (Histone H4 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR01_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.160e-64
Identity = 109/126 (86.51%), Postives = 114/126 (90.48%), Query Frame = 0

Query:    2 IDSILSHNYFSSELFSTLPRN--MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
            I  I+ ++Y  S   ST P +  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct:    3 ISFIVLYSYLGS---STHPNSQIMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 125

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot

BLAST of mRNA_H-elongata_contig69639.14613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2J6LJW1_LACSA	1.160e-65	88.14	Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID...	[more]
A0A3L6V663_9STRA	2.630e-65	89.17	Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID...	[more]
UPI001C056972	3.020e-65	96.33	histone H4-like n=1 Tax=Melanotaenia boesemani Tax...	[more]
UPI0008738E0C	4.690e-65	90.43	histone H4-like n=1 Tax=Lates calcarifer TaxID=818...	[more]
A0A6J1VXA0_9SAUR	8.870e-65	88.89	Histone H4 n=1 Tax=Notechis scutatus TaxID=8663 Re...	[more]
UPI0013020A52	1.090e-64	97.22	uncharacterized protein LOC100916825 n=1 Tax=Sarco...	[more]
A0A6G1SJU5_9ACAR	1.640e-64	86.89	Histone H4 (Fragment) n=1 Tax=Aceria tosichella Ta...	[more]
A0A453MXZ5_AEGTS	1.790e-64	86.89	Histone H4 n=2 Tax=Aegilops tauschii subsp. strang...	[more]
A0A1J3ENA7_NOCCA	1.790e-64	95.33	Histone H4 (Fragment) n=2 Tax=Noccaea caerulescens...	[more]
W7TR01_9STRA	2.160e-64	86.51	Histone H4 n=4 Tax=Monodopsidaceae TaxID=425072 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 111..122 score: 97.79 coord: 42..61 score: 93.38 coord: 84..98 score: 91.96 coord: 99..111 score: 90.05 coord: 62..82 score: 93.56 coord: 27..38 score: 95.59
IPR001951	Histone H4	SMART	SM00417	h44	coord: 38..112 e-value: 1.8E-29 score: 113.9
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 58..118 e-value: 3.6E-8 score: 33.5
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 24..125 e-value: 4.6E-60 score: 202.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 25..124
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 14..125
None	No IPR available	PANTHER	PTHR10484:SF171		coord: 14..125
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 37..41

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig69639	contig	H-elongata_contig69639:1989..2366 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig69639.14613.1	mRNA_H-elongata_contig69639.14613.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig69639 1977..2366 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig69639.14613.1 ID=prot_H-elongata_contig69639.14613.1|Name=mRNA_H-elongata_contig69639.14613.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
MIDSILSHNYFSSELFSTLPRNMSGRGKGGKGLGKGGAKRHRKVLRDNIQ
GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHAR
RKTVTAMDVVYALKRQGRTLYGFGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR035425	CENP-T/H4_C
IPR009072	Histone-fold
IPR019809	Histone_H4_CS