prot_H-elongata_contig68920.14534.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68920.14534.1
Unique Nameprot_H-elongata_contig68920.14534.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length391
Homology
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BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: D7G485_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G485_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 8.140e-57
Identity = 169/403 (41.94%), Postives = 207/403 (51.36%), Query Frame = 0 
Query:   18 LSPSLNLLAAALAGAVNQIFTLPLENITTKMQVQQQ---TVANEGGSPTPRPCARNRVCATGTAAATLPYDGGVDGMTGSGQGTERLKPRGRDNAESTERGRQQTEHQETRQSPQPPKRRRQRPRTSLTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITA-----VGADTLSSGRSPSLGGQGGN--FLDPLEAFVVAAAAKCLATMITYPLIRAKVVLMTSTSDPFSSGGLPPPHPLQSFPTTPVTTTTIQ--TADTDVVAS-------EPRGAGDGGPCDPPPLAAGERLTTP------------EQAGGILSPAPVTLGESLMEAGGVFTVPETAGGRNRDVRSVDNCTSGIGAVLVEIVRREGLGGLYAGCGAQVIPRV 389
            L PSLNLLAAA+AGAVNQ FTLPLENITT+MQ   Q   +V N  G               G    + P DG   G+     GT R  P     A+ T+ G           +  P KR ++RPR S+ AV   LYREG G+ RFWRGFAPSL+LTCNPAINYTAFD+LKA WL+RR  A     VG+ T ++G S       G   FL+PLEAF+VAAAAK LAT++TYPLIRAKVVLMT+ S P S+  +       S P  P   +  Q  T    V  S       EP G G  G  +       ER  T                GG   P   +LG +  E+        +A    R   +       +  VLV+I RREG+GGLYAGCGAQ++  +
Sbjct:  191 LRPSLNLLAAAMAGAVNQAFTLPLENITTRMQTAPQRTPSVENNDGE------GAGERGGHGAMEGSSPLDGRRCGVGNDTNGTWR-DPVPATTAKVTQAGGD---------NQAPIKRGQRRPRQSVAAVTGELYREGGGLGRFWRGFAPSLILTCNPAINYTAFDILKALWLRRRDAAAVAAGVGSST-TAGASXXXXXXXGTEGFLNPLEAFLVAAAAKSLATLVTYPLIRAKVVLMTAPSSP-SAPIVDRGRGNCSSPAVPPAASASQLITPKGHVFGSCGSGKIGEPTGEGRDGGDERLSNNGEERAATAXXXXADADATGMSDRGGSGHPIDASLGSAAAES---TVAASSASAVGRGEGTTGGEMHSMATVLVDIFRREGIGGLYAGCGAQLLHTI 572
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BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: A0A835YZE1_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 6.500e-25
Identity = 92/251 (36.65%), Postives = 119/251 (47.41%), Query Frame = 0 
Query:   22 LNLLAAALAGAVNQIFTLPLENITTKMQVQQQTVANEGGSPTPRPCARNRVCAT-GTAAATLPYDGGVDGMTGSGQGTERLKPRGRDNAESTERGRQQTEHQETRQSPQPPKRRRQRPRT-----------------------SLTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVLMT 248
            L+LL AALAGA+N + TLP++N+ T++Q      A+    P  R    ++   T G  A   P         G G G                   QQ +H E       P     R                          SL+A   +L+ EG G+ RFWRG  PS++LTCNPAINYTAFD LKA +L R +        + GR P   G    FL PL AF +AAAAK +AT++TYPLIRAKV++MT
Sbjct:  124 LSLLTAALAGAINMLLTLPIDNVCTRLQT-----ADAPAQPPARRDGESKAAVTHGETAQQTPSAVEAGDAGGDGNGAP-----------------QQQQHSEDVSVGGTPVATSLREXXXXXXXXXXXXXXXXXXXXXXXXXSLSAAVADLHDEG-GVPRFWRGLLPSMILTCNPAINYTAFDALKAAYLARWV--------NRGRPP---GHHAEFLGPLAAFGLAAAAKAVATLVTYPLIRAKVIMMT 340
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BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: D0NK70_PHYIT (Mitochondrial Carrier (MC) Family n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NK70_PHYIT)

HSP 1 Score: 88.2 bits (217), Expect = 1.110e-15
Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = 0 
Query:  138 PRTSLTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVL 246
            P  ++  +A  +Y E +G+T FW+GF PSLVL  NP+INYT FD LK      ++ A  A  +SS             L  LEAF++AA AK +AT+ITYP+IRAKV++
Sbjct:  176 PSRTMWGIAKEIYAE-DGLTSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQHSKMVATNATRMSS-------------LTALEAFILAAIAKAVATIITYPVIRAKVLM 270
[Close]
BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: A0A5D6XFK1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFK1_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.270e-15
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 0 
Query:  141 SLTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVL 246
            S+  +A  +Y E +G+  FW+GF PSLVL  NP+IN+T FD LK      ++ A GA  L+S             L  LEAFV+AA AK +AT++TYP+IRAKV++
Sbjct:  187 SMLELAREIYAE-DGVLSFWKGFVPSLVLVTNPSINFTIFDKLKLRVQTAKMAAAGASRLAS-------------LTALEAFVIAAIAKAIATLLTYPIIRAKVLM 278
[Close]
BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: A0A421FVX9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FVX9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.590e-15
Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 0 
Query:  141 SLTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVL 246
            ++  +A  +Y E +G+  FW+GF PSLVL  NP+INYT FD LK      ++ A  A  LSS             L  LEAF++AA AK +AT+ITYP+IRAKV++
Sbjct:  157 TMWGIAKEIYAE-DGLMSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQHSKMAASNAKRLSS-------------LSALEAFILAAIAKAVATIITYPIIRAKVLM 248
[Close]
BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: H3GK99_PHYRM (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3GK99_PHYRM)

HSP 1 Score: 85.5 bits (210), Expect = 9.460e-15
Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = 0 
Query:  138 PRTSLTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVL 246
            P  ++ ++A  +Y E +G+  FW+GF PSLVL  NP+INYT FD LK      ++ A  A  +SS             L  LEAF++AA AK +AT+ITYP+IRAKV++
Sbjct:  177 PSRTMWSLAQEIYAE-DGLLSFWKGFIPSLVLVSNPSINYTVFDKLKLQLQHSKMAASNAKRVSS-------------LTALEAFILAAIAKAIATIITYPIIRAKVLM 271
[Close]
BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: K3W5V3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5V3_GLOUD)

HSP 1 Score: 84.0 bits (206), Expect = 3.620e-14
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0 
Query:  145 VALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVL 246
            +A  +Y E +G+  FW+GF PSLVL  NP+IN+T FD LK    + ++ A GA  L+S             L   EAFV+AA AK +AT+ITYP+IRAKV++
Sbjct:  194 IAREIYAE-DGLVSFWKGFIPSLVLVTNPSINFTIFDKLKLRLQRSKMLAAGATRLAS-------------LTAWEAFVLAAIAKAIATVITYPVIRAKVLM 281
[Close]
BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: M4BP29_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BP29_HYAAE)

HSP 1 Score: 82.8 bits (203), Expect = 5.860e-14
Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 0 
Query:  142 LTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVLMTSTSDP 253
            +  +A ++Y E NG   FW+GF PSLVL  NP+INYT FD LK+     ++ A  A   SS             L  LEAFV+AA AK +AT++TYP+IRAKV LM +  +P
Sbjct:  159 MWGIARDIYAE-NGWMSFWKGFIPSLVLVSNPSINYTIFDRLKSQLQLSKMAAGKAKRASS-------------LTALEAFVLAAIAKAVATVLTYPVIRAKV-LMQAQKEP 255
[Close]
BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: A0A3M6VFR0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFR0_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.170e-14
Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 0 
Query:  141 SLTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVLMTSTSDPFS 255
            ++  +A  +Y E +G+  FW+GF PSLVL  NP+INYT FD LK      ++ A  A  +SS             L  LEAF +AA AK +AT++TYP+IRAKV LM +   P S
Sbjct:  161 TMWGIAKEIYAE-DGLMSFWKGFIPSLVLVSNPSINYTIFDKLKLQLQHSKMAAGNAKRVSS-------------LTALEAFTLAAIAKAIATILTYPVIRAKV-LMQAQKKPIS 260
[Close]
BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Match: A0A024GMU3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMU3_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.680e-13
Identity = 69/231 (29.87%), Postives = 99/231 (42.86%), Query Frame = 0 
Query:   18 LSPSLNLLAAALAGAVNQIFTLPLENITTKMQVQQQTVANEGGSPTPRPCARNRVCATGTAAATLPYDGGVDGMTGSGQGTERLKPRGRDNAESTERGRQQTEHQETRQSPQPPKRRRQRPRTSLTAVALNLYREGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTLSSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVLMT 248
            L+ SL+LL A LAGA+N   TLPLE I T+ Q+                 A+N                             + K +G                                    + A+   +Y E +G+T FWRG+AP+LVLT NP+INYT FD LK    + + TA+   T    R+             LEAF++AA +K +AT++TYP+IRAKV++ +
Sbjct:  114 LTTSLSLLVATLAGAINMTMTLPLEVINTRAQLS----------------AKNET---------------------------KFKSKG------------------------------------VFALGSEIYHE-DGLTAFWRGYAPALVLTSNPSINYTIFDTLKDTLQRWKRTAL---TKHCQRAT---------FTALEAFLLAAISKAIATVVTYPIIRAKVLMQS 252
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68920.14534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G485_ECTSI8.140e-5741.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZE1_9STRA6.500e-2536.65Mitochondrial carrier domain-containing protein n=... [more]
D0NK70_PHYIT1.110e-1544.95Mitochondrial Carrier (MC) Family n=1 Tax=Phytopht... [more]
A0A5D6XFK1_9STRA3.270e-1545.28Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A421FVX9_9STRA7.590e-1545.28Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]
H3GK99_PHYRM9.460e-1544.04Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
K3W5V3_GLOUD3.620e-1446.08Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
M4BP29_HYAAE5.860e-1445.54Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]
A0A3M6VFR0_9STRA8.170e-1443.48Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A024GMU3_9STRA2.680e-1329.87Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 19..61
e-value: 4.0E-5
score: 23.5
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 113..259
e-value: 9.4E-11
score: 42.8
coord: 3..80
e-value: 4.3E-6
score: 27.5
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 11..252
NoneNo IPR availablePANTHERPTHR45939FAMILY NOT NAMEDcoord: 12..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68920contigH-elongata_contig68920:592..2025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68920.14534.1mRNA_H-elongata_contig68920.14534.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68920 592..2043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68920.14534.1 ID=prot_H-elongata_contig68920.14534.1|Name=mRNA_H-elongata_contig68920.14534.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=391bp
MRRRTGAAGAGPKNNHNLSPSLNLLAAALAGAVNQIFTLPLENITTKMQV
QQQTVANEGGSPTPRPCARNRVCATGTAAATLPYDGGVDGMTGSGQGTER
LKPRGRDNAESTERGRQQTEHQETRQSPQPPKRRRQRPRTSLTAVALNLY
REGNGMTRFWRGFAPSLVLTCNPAINYTAFDLLKAFWLKRRITAVGADTL
SSGRSPSLGGQGGNFLDPLEAFVVAAAAKCLATMITYPLIRAKVVLMTST
SDPFSSGGLPPPHPLQSFPTTPVTTTTIQTADTDVVASEPRGAGDGGPCD
PPPLAAGERLTTPEQAGGILSPAPVTLGESLMEAGGVFTVPETAGGRNRD
VRSVDNCTSGIGAVLVEIVRREGLGGLYAGCGAQVIPRVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf