prot_H-elongata_contig68850.14523.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68850.14523.1
Unique Nameprot_H-elongata_contig68850.14523.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: D8LL30_ECTSI (VPS9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL30_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 4.270e-77
Identity = 127/164 (77.44%), Postives = 142/164 (86.59%), Query Frame = 0
Query:   11 TWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVGVLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGL-RGFQETARVGLQAHQLKVKEEEEQERIFHSNFQLERDGAAGG 173
            TW+DAEA+LLKMS MRCPGDML+CI++CTRIV  LLTG    GG LPGADDFLPALILLVKRANPP +HS LEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLE+VDASVL+IAHG+FERGL +GFQE+ARVGLQAHQ +VK+EEE  R+ HSN Q   +G   G
Sbjct:  321 TWADAEAQLLKMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPGLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQGFQESARVGLQAHQQEVKKEEEHARLLHSNSQGRANGPIPG 484          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: A0A7S2W9D2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9D2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 7.790e-30
Identity = 65/131 (49.62%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    9 DATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVGVLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLRGFQETAR 139
            D  W ++   L KMS    P   +  ++RC++ +  +LT +  G   LPGADDFLPA+IL+VK+ANP  +HSNL F+Q+F    +LLSEAGY+ T L SAV FL+DVDA+ LTI   EFE G++  QE AR
Sbjct:  293 DEMWQESITCLRKMSAEYGPTAKIDQVVRCSKSIASVLTTAMRGK--LPGADDFLPAMILVVKKANPSRLHSNLTFIQTFAPQHRLLSEAGYIFTHLSSAVAFLQDVDANALTITSEEFEAGIQRSQEQAR 421          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: A0A6P3Z678_ZIZJJ (vacuolar protein sorting-associated protein 9A-like n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3Z678_ZIZJJ)

HSP 1 Score: 114 bits (285), Expect = 4.140e-28
Identity = 59/130 (45.38%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    9 DATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVG-VLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLRGFQET 137
            DA+W  AE EL K+S  + P + L CII C +++  +LL  +     VL GADDFLP LI +  +ANPP +HSNL+F+Q +R  +KL+SEA +  T LVSA  F+ D++A  L+I   EFE  ++  +ET
Sbjct:   77 DASWLLAEKELQKISAFKAPREKLLCIINCCKVINNLLLNAAMSENHVLAGADDFLPVLIYVTIKANPPQLHSNLKFIQLYRRQAKLVSEAAFYFTNLVSAKTFIVDLNAKSLSIDEIEFEESMQAARET 206          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: A0A7S2G2K9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G2K9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 5.460e-28
Identity = 63/141 (44.68%), Postives = 89/141 (63.12%), Query Frame = 0
Query:    1 MNESPKGADATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVGVLLTGS--NEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLRGFQETAR 139
            M   PK ++  W+ AE  +  +S    P   +Q I+  +R +  +LT +    G   LPGADDFLPA+IL+VKRANPP +HS+L+ +  +  P +L+SEAGYV T L SAV FL  +DA+ L+I   +F+RG+R  QE AR
Sbjct:  150 MTARPK-SEEEWATAEGMIRSLSREAGPTAKIQIIVELSREIMRVLTEACQQNGSHALPGADDFLPAMILVVKRANPPTLHSDLKLIYQYSAPVRLMSEAGYVFTHLQSAVAFLRTLDATALSITPSDFDRGMRRCQEQAR 289          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: A0A059BY07_EUCGR (VPS9 domain-containing protein n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BY07_EUCGR)

HSP 1 Score: 114 bits (286), Expect = 3.620e-27
Identity = 58/125 (46.40%), Postives = 82/125 (65.60%), Query Frame = 0
Query:    9 DATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVG-VLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLR 132
            +A+W  AE EL KM+  + P + L CI+ C R++  +LL  S     VL GADDFLP LI +  +ANPP +HSNL+F+Q +R  +KL+SEA Y LT L+SA  F+ D++A  L+I   EFE  ++
Sbjct:  147 EASWLLAEKELQKMNSFKAPREKLLCIMNCCRVINNLLLNASMSENHVLAGADDFLPVLIYVTIKANPPELHSNLKFIQLYRRQAKLVSEAAYYLTNLISAKSFIADLNARSLSINEIEFEENMQ 271          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: UPI002024480A (vacuolar protein sorting-associated protein 9A-like isoform X1 n=3 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI002024480A)

HSP 1 Score: 114 bits (285), Expect = 4.050e-27
Identity = 59/130 (45.38%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    9 DATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVG-VLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLRGFQET 137
            DA+W  AE EL K+S  + P + L CII C +++  +LL  +     VL GADDFLP LI +  +ANPP +HSNL+F+Q +R  +KL+SEA +  T LVSA  F+ D++A  L+I   EFE  ++  +ET
Sbjct:  138 DASWLLAEKELQKISAFKAPREKLLCIINCCKVINNLLLNAAMSENHVLAGADDFLPVLIYVTIKANPPQLHSNLKFIQLYRRQAKLVSEAAFYFTNLVSAKTFIVDLNAKSLSIDEIEFEESMQAARET 267          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: A0A5J5BP11_9ASTE (VPS9 domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BP11_9ASTE)

HSP 1 Score: 113 bits (282), Expect = 9.650e-27
Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 0
Query:    9 DATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVGVLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLR 132
            +A+W  AE EL K++  + P + L CI+ C R++  LL  S+     +PGADDFLP LI ++ +ANPP +HSNL+F+Q +R  +KL+SEA Y  T LVSA  F+ D+D   L+I   EF   ++
Sbjct:  136 NASWLLAEKELQKINAFKAPREKLLCILNCCRVINNLLLNSSMSENRVPGADDFLPVLIYVMIKANPPQLHSNLKFIQLYRRQAKLVSEAAYYFTNLVSAKSFIVDLDGKSLSIDETEFHDSMQ 259          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: UPI001CF9A80A (vacuolar protein sorting-associated protein 9A-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF9A80A)

HSP 1 Score: 114 bits (284), Expect = 1.030e-26
Identity = 57/125 (45.60%), Postives = 85/125 (68.00%), Query Frame = 0
Query:    9 DATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVG-VLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLR 132
            +A+W  AE ELLK++ ++ P + L C++ C R++  +LL  S     VL GADDFLP LI ++ +ANPP +HSNL+F+Q +R  +KL+SEA Y  T LVSA  F+ D++A+ L+I   EFE  ++
Sbjct:  137 EASWLLAEKELLKINAVKAPREKLLCVMNCCRVISNLLLNASMSENIVLAGADDFLPVLIYVMIKANPPQLHSNLKFIQLYRRQTKLVSEAAYYFTNLVSAKTFVVDLNANSLSIEEVEFEESMQ 261          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: UPI001C4FB132 (vacuolar protein sorting-associated protein 9A-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FB132)

HSP 1 Score: 112 bits (281), Expect = 1.780e-26
Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 0
Query:    9 DATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVG-VLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLRGFQETARVGLQAHQLKVK 150
            +A+W  AE EL KM+  + P + L CI+ C +++  +LL  S     VL GADDFLP LI +  +ANPP +HSNL+F+Q FR  SKL+SE  Y  T L+SA  F+ D+D   LT+   EF+  +      AR+ LQ + L  +
Sbjct:  133 EASWLLAEKELQKMNAFKSPREKLLCILNCCKVINNLLLNVSMSAHRVLAGADDFLPVLIYVTIKANPPQLHSNLKFIQLFRQQSKLVSEVAYYFTNLMSAKLFIVDLDCKSLTMDEAEFQENMLA----ARLELQMNMLPAR 271          
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Match: A0A6P5WR63_DURZI (vacuolar protein sorting-associated protein 9A-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5WR63_DURZI)

HSP 1 Score: 112 bits (279), Expect = 3.350e-26
Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 0
Query:    9 DATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVG-VLLTGSNEGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEDVDASVLTIAHGEFERGLR 132
            +A+W  AE EL K++  + P + L CI+ C R++  +LL  S     VL GADDFLP LI +  +ANPP +HSNL+F+Q +R   KL+SEA Y LT LVSA  F+ D++A  L+I   EFE  ++
Sbjct:  146 EASWLLAEKELKKINAFKAPREKLLCIMNCCRVINNLLLNASISEDHVLGGADDFLPVLIYVTIKANPPQLHSNLKFIQLYRRQDKLISEAAYFLTNLVSAKSFIVDLNAKSLSIEEIEFEESMQ 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68850.14523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL30_ECTSI4.270e-7777.44VPS9 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2W9D2_9STRA7.790e-3049.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6P3Z678_ZIZJJ4.140e-2845.38vacuolar protein sorting-associated protein 9A-lik... [more]
A0A7S2G2K9_9STRA5.460e-2844.68Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A059BY07_EUCGR3.620e-2746.40VPS9 domain-containing protein n=5 Tax=Myrtoideae ... [more]
UPI002024480A4.050e-2745.38vacuolar protein sorting-associated protein 9A-lik... [more]
A0A5J5BP11_9ASTE9.650e-2744.35VPS9 domain-containing protein n=1 Tax=Nyssa sinen... [more]
UPI001CF9A80A1.030e-2645.60vacuolar protein sorting-associated protein 9A-lik... [more]
UPI001C4FB1321.780e-2642.66vacuolar protein sorting-associated protein 9A-lik... [more]
A0A6P5WR63_DURZI3.350e-2646.40vacuolar protein sorting-associated protein 9A-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003123VPS9 domainSMARTSM00167vps9_2coord: 13..129
e-value: 6.1E-10
score: 49.0
IPR003123VPS9 domainPFAMPF02204VPS9coord: 12..116
e-value: 5.4E-25
score: 87.6
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 1..121
score: 31.552
IPR037191VPS9 domain superfamilyGENE3D1.20.1050.80coord: 2..139
e-value: 5.3E-39
score: 135.4
IPR037191VPS9 domain superfamilySUPERFAMILY109993VPS9 domaincoord: 5..129
NoneNo IPR availablePANTHERPTHR23101RAB GDP/GTP EXCHANGE FACTORcoord: 13..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68850contigH-elongata_contig68850:402..3257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68850.14523.1mRNA_H-elongata_contig68850.14523.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68850 402..3257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68850.14523.1 ID=prot_H-elongata_contig68850.14523.1|Name=mRNA_H-elongata_contig68850.14523.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
MNESPKGADATWSDAEAELLKMSDMRCPGDMLQCIIRCTRIVGVLLTGSN
EGGGVLPGADDFLPALILLVKRANPPNVHSNLEFVQSFRDPSKLLSEAGY
VLTQLVSAVCFLEDVDASVLTIAHGEFERGLRGFQETARVGLQAHQLKVK
EEEEQERIFHSNFQLERDGAAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003123VPS9
IPR037191VPS9_dom_sf