prot_H-elongata_contig6801.14423.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6801.14423.1
Unique Nameprot_H-elongata_contig6801.14423.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6801.14423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..78
e-value: 4.2E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR22663:SF17IP08077P-RELATEDcoord: 1..100
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 6..48
IPR042123Vilya/Cst9/RNF212PANTHERPTHR22663UNCHARACTERIZEDcoord: 1..100
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 7..45
score: 9.789

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6801contigH-elongata_contig6801:1350..3074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6801.14423.1mRNA_H-elongata_contig6801.14423.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6801 1350..3238 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6801.14423.1 ID=prot_H-elongata_contig6801.14423.1|Name=mRNA_H-elongata_contig6801.14423.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MSFLPICNVCLLEIGSGTQGILLSCGHFVCYGCCRAPGPSICPHCGSPAR
AAALDHPPAEVQDYLQSPLAQFRASSDVVMFQLEHFRSVAKQASKALHEL
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR042123Vilya/Cst9/RNF212
IPR001841Znf_RING