prot_H-elongata_contig67833.14397.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67833.14397.1
Unique Nameprot_H-elongata_contig67833.14397.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: A0A1L2F1H7_9PHAE (Nad4L n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1H7_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.050e-19
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0
Query:    4 LSVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            LSV+ NFIIFSVCL DLIGQIFAIFILI+A CE   GLAIILV+FRVRGSIR DQA +L+
Sbjct:   41 LSVSLNFIIFSVCLADLIGQIFAIFILIVAACESSIGLAIILVYFRVRGSIRIDQASLLK 100          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: E6ZER2_ECTSI (NADH-ubiquinone oxidoreductase, subunit 4L n=85 Tax=Phaeophyceae TaxID=2870 RepID=E6ZER2_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 5.710e-19
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0
Query:    4 LSVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            LSV+ NFIIFS CLGDL GQIFAIFIL+IA CE   GLAIILV+FRVRGSIR DQA +L+
Sbjct:   40 LSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSVGLAIILVYFRVRGSIRIDQASLLK 99          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: Q94Z11_PYLLI (NADH dehydrogenase subunit 4L n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z11_PYLLI)

HSP 1 Score: 82.0 bits (201), Expect = 5.710e-19
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0
Query:    4 LSVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            LSV+ NFIIFSVCL DL GQIFAIFIL+IA CE   GLAIILVFFRVRGSIR DQA +L+
Sbjct:   40 LSVSLNFIIFSVCLDDLTGQIFAIFILVIAACESSIGLAIILVFFRVRGSIRLDQASLLK 99          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: A0A8E8PEE6_9PHAE (Nad4L n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEE6_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.550e-16
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    4 LSVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            L V+  F+IFSVCLGDL GQIFAI+IL+IA CE   GLAIILV+FRV+GSIR DQA +L+
Sbjct:   40 LGVSLGFLIFSVCLGDLQGQIFAIYILVIAACESSIGLAIILVYFRVKGSIRLDQASLLK 99          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: A0A4Y5T8D2_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8D2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 5.120e-15
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    5 SVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            S++ NF+IFSV L D+IGQIFA+FIL +A CE   GLAIILV++RVRGSIR DQA +L+
Sbjct:   41 SISLNFLIFSVYLDDIIGQIFALFILTVAACESSIGLAIILVYYRVRGSIRVDQASLLK 99          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: Q2TUC4_DICDH (NADH dehydrogenase subunit 4L n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUC4_DICDH)

HSP 1 Score: 72.0 bits (175), Expect = 5.120e-15
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    5 SVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            S++ NF+IFSV L D+IGQIFA+FIL IA CE   GLAIILV++RVRGSIR DQA +L+
Sbjct:   41 SISLNFLIFSVYLDDMIGQIFALFILTIAACESSIGLAIILVYYRVRGSIRIDQASLLK 99          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: A0A8F0FEY2_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FEY2_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 7.260e-15
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    5 SVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            SV+ NF+IFSV L D++GQIFA+FIL +A CE   GLAIILV++RVRGSIR DQA +L+
Sbjct:   41 SVSLNFLIFSVYLDDIMGQIFAVFILAVAACESSVGLAIILVYYRVRGSIRVDQAALLK 99          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: NUOK_BRUA1 (NADH-quinone oxidoreductase subunit K n=38 Tax=Brucella TaxID=234 RepID=NUOK_BRUA1)

HSP 1 Score: 61.2 bits (147), Expect = 9.500e-11
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    2 VVLSVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            ++LSVN NF+ FS  LGDL+GQ+FA+F+L +A  E   GLAI++VFFR RGSI  +   V++
Sbjct:   40 ILLSVNLNFVAFSSQLGDLVGQVFALFVLTVAAAEAAIGLAILVVFFRNRGSIAVEDVNVMK 101          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: A0A316C2W8_PSESE (NADH-quinone oxidoreductase subunit K n=7 Tax=Hyphomicrobiales TaxID=356 RepID=A0A316C2W8_PSESE)

HSP 1 Score: 61.2 bits (147), Expect = 9.500e-11
Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    2 VVLSVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            ++LSVN NF+ FS  LGD+IGQ+FA+F+L +A  E   GLAI++VFFR RGSI  +   +++
Sbjct:   40 ILLSVNLNFVAFSATLGDMIGQVFALFVLTVAAAEAAIGLAILVVFFRNRGSIAVEDVNMMK 101          
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Match: A0A4Y5T7L0_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A4Y5T7L0_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.020e-10
Identity = 32/60 (53.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    4 LSVNFNFIIFSVCLGDLIGQIFAIFILIIADCE---GLAIILVFFRVRGSIRTDQAPVLE 60
            LS++ NF++FSV L D+IGQ+F I ++ +A CE   GLA+ILV++RVRGSI  D+A +L 
Sbjct:   45 LSISLNFLLFSVFLDDIIGQLFGILVISVAACESSVGLALILVYYRVRGSILLDKASLLR 104          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67833.14397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1L2F1H7_9PHAE2.050e-1978.33Nad4L n=1 Tax=Coccophora langsdorfii TaxID=74099 R... [more]
E6ZER2_ECTSI5.710e-1976.67NADH-ubiquinone oxidoreductase, subunit 4L n=85 Ta... [more]
Q94Z11_PYLLI5.710e-1978.33NADH dehydrogenase subunit 4L n=1 Tax=Pylaiella li... [more]
A0A8E8PEE6_9PHAE1.550e-1670.00Nad4L n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID... [more]
A0A4Y5T8D2_9PHAE5.120e-1566.10NADH dehydrogenase subunit 4L n=1 Tax=Dictyopteris... [more]
Q2TUC4_DICDH5.120e-1567.80NADH dehydrogenase subunit 4L n=1 Tax=Dictyota dic... [more]
A0A8F0FEY2_9PHAE7.260e-1566.10NADH dehydrogenase subunit 4L n=1 Tax=Protohalopte... [more]
NUOK_BRUA19.500e-1153.23NADH-quinone oxidoreductase subunit K n=38 Tax=Bru... [more]
A0A316C2W8_PSESE9.500e-1151.61NADH-quinone oxidoreductase subunit K n=7 Tax=Hyph... [more]
A0A4Y5T7L0_9PHAE1.020e-1053.33NADH dehydrogenase subunit 4L n=1 Tax=Ishige okamu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001133NADH-ubiquinone oxidoreductase chain 4L/KPANTHERPTHR11434NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT ND4Lcoord: 2..51
NoneNo IPR availablePANTHERPTHR11434:SF15NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4Lcoord: 2..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..45
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67833contigH-elongata_contig67833:1932..2111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67833.14397.1mRNA_H-elongata_contig67833.14397.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67833 1932..2111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67833.14397.1 ID=prot_H-elongata_contig67833.14397.1|Name=mRNA_H-elongata_contig67833.14397.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
IVVLSVNFNFIIFSVCLGDLIGQIFAIFILIIADCEGLAIILVFFRVRGS
IRTDQAPVLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001133NADH_UbQ_OxRdtase_chain4L/K