prot_H-elongata_contig67441.14350.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67441.14350.1
Unique Nameprot_H-elongata_contig67441.14350.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length34
Homology
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BLAST of mRNA_H-elongata_contig67441.14350.1 vs. uniprot
Match: A0A835YIM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM6_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 1.690e-5
Identity = 18/31 (58.06%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:    1 MSEVKELQARVDAGEVCPGLGSKADSICNQA 31
            M ++  L+++V+ GE+CPGLG+KAD+ICNQA
Sbjct:   45 MKDIDALKSKVEGGELCPGLGAKADAICNQA 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67441.14350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YIM6_9STRA1.690e-558.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67441contigH-elongata_contig67441:2871..2972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67441.14350.1mRNA_H-elongata_contig67441.14350.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67441 153..2999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67441.14350.1 ID=prot_H-elongata_contig67441.14350.1|Name=mRNA_H-elongata_contig67441.14350.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=34bp
MSEVKELQARVDAGEVCPGLGSKADSICNQART*
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