prot_H-elongata_contig66852.14286.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66852.14286.1
Unique Nameprot_H-elongata_contig66852.14286.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length147
Homology
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: A0A6H5J7N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7N1_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 8.890e-42
Identity = 69/82 (84.15%), Postives = 75/82 (91.46%), Query Frame = 0
Query:   65 SFFEALPAEEVEQRLKAFHKGPLHEDFHLCCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNFL 146
            +FF ALPAE+VEQRLKA H GP HE FHLCCVC+DRPRDAALIHGKT+HQACCYDCA+ELFERGLPCP CRQ IAHVVKNF+
Sbjct:  536 AFF-ALPAEDVEQRLKAIHAGPSHEGFHLCCVCLDRPRDAALIHGKTAHQACCYDCAVELFERGLPCPYCRQPIAHVVKNFV 616          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: R7V6A3_CAPTE (RING-type domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7V6A3_CAPTE)

HSP 1 Score: 79.0 bits (193), Expect = 6.410e-17
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   94 CCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNFL 146
            C +CM +P++A++IHGKT HQ CCY CA  L  RG PCP CR+ I  V+KNF+
Sbjct:    1 CVICMQKPKEASIIHGKTGHQICCYVCAKRLRRRGKPCPVCRRPIQKVIKNFI 53          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: A0A8J1TC64_OWEFU (E3 ubiquitin-protein ligase Mdm2 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TC64_OWEFU)

HSP 1 Score: 81.3 bits (199), Expect = 4.400e-15
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = 0
Query:   93 LCCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNFL 146
            +C +C+ +P+DA++IHGKT HQ CCY CA +L +R  PCP CR+ I +V+KNFL
Sbjct:  857 VCAICLTKPKDASIIHGKTGHQVCCYKCAKKLLKRRKPCPVCRRPIENVIKNFL 910          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: A0A1S3KAV1_LINUN (E3 ubiquitin-protein ligase Mdm2 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KAV1_LINUN)

HSP 1 Score: 77.0 bits (188), Expect = 1.320e-13
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   86 PLHEDFH-LCCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNFL 146
            PL  +++ LC +CM +P++A++IHGKT HQ  CY CA  L   G PCP CR+ I  V+KNFL
Sbjct:  843 PLGNEYNDLCVICMSKPKEASIIHGKTGHQVTCYSCAKRLKWSGRPCPICRRPIQKVIKNFL 904          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: UPI00106DACC5 (uncharacterized protein LOC114516926 isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106DACC5)

HSP 1 Score: 76.3 bits (186), Expect = 1.960e-13
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 0
Query:   71 PAEEVEQRLKAFHKGPLHEDFHLCCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNF 145
            P+EEV+  + A       +D   C +C++RP+DA ++HG T H  CC  CA ELF RG  CP CR  I  V+K +
Sbjct:  339 PSEEVDNNVGATGPPGAQDDVGNCVICLERPKDATIVHGTTGHVCCCTYCASELFRRGENCPICRAPIQTVIKQY 413          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: A0A6A0H0E1_HYAAZ (RING-type domain-containing protein n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0H0E1_HYAAZ)

HSP 1 Score: 75.5 bits (184), Expect = 4.480e-13
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0
Query:   92 HLCCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNFL 146
            +LC +C DRP+DAA+IHGK SHQA CY CA  LF R   CP CR+ I  + KN +
Sbjct:  727 NLCIMCQDRPKDAAIIHGKISHQATCYRCAKTLFNRKQRCPVCRRKILRIAKNII 781          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: A0A8B7NGC1_HYAAZ (platelet binding protein GspB-like n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NGC1_HYAAZ)

HSP 1 Score: 75.5 bits (184), Expect = 4.730e-13
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0
Query:   92 HLCCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNFL 146
            +LC +C DRP+DAA+IHGK SHQA CY CA  LF R   CP CR+ I  + KN +
Sbjct: 1364 NLCIMCQDRPKDAAIIHGKISHQATCYRCAKTLFNRKQRCPVCRRKILRIAKNII 1418          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: A0A7S4NCY2_9EUKA (Hypothetical protein n=2 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NCY2_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 1.720e-10
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   94 CCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNF 145
            CC+CM+ PR+A+++HG+T+H  CC +CA  L  +G  CP C   I  VV+N+
Sbjct:  155 CCICMEAPRNASVVHGETAHICCCLECARTLKAKGHTCPICNDPIDAVVRNY 206          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: A0A851F4Y4_PITSO (Protein Mdm4 (Fragment) n=1 Tax=Pitta sordida TaxID=9163 RepID=A0A851F4Y4_PITSO)

HSP 1 Score: 67.4 bits (163), Expect = 2.720e-10
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   94 CCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNFL 146
            CCVC+ RPRD  ++HG+T+H   CY CA  L ++  PCP CR+ I  V++ F+
Sbjct:  432 CCVCLHRPRDGNIVHGRTAHLVACYRCARMLKKKKSPCPVCRKEIGMVIRIFM 484          
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Match: UPI001F034E19 (E3 ubiquitin-protein ligase Mdm2-like isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F034E19)

HSP 1 Score: 65.1 bits (157), Expect = 1.440e-9
Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 0
Query:   94 CCVCMDRPRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNF 145
            C +C++RP+DA ++HG T H  CC  CAL L+     CP CR+ I  ++K +
Sbjct:  293 CVICLERPKDATIVHGDTGHVCCCMTCALHLYRTRSRCPICREPIDRIIKQY 344          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66852.14286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5J7N1_9PHAE8.890e-4284.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R7V6A3_CAPTE6.410e-1756.60RING-type domain-containing protein (Fragment) n=1... [more]
A0A8J1TC64_OWEFU4.400e-1555.56E3 ubiquitin-protein ligase Mdm2 n=1 Tax=Owenia fu... [more]
A0A1S3KAV1_LINUN1.320e-1351.61E3 ubiquitin-protein ligase Mdm2 n=1 Tax=Lingula u... [more]
UPI00106DACC51.960e-1342.67uncharacterized protein LOC114516926 isoform X1 n=... [more]
A0A6A0H0E1_HYAAZ4.480e-1356.36RING-type domain-containing protein n=1 Tax=Hyalel... [more]
A0A8B7NGC1_HYAAZ4.730e-1356.36platelet binding protein GspB-like n=1 Tax=Hyalell... [more]
A0A7S4NCY2_9EUKA1.720e-1046.15Hypothetical protein n=2 Tax=Prymnesium polylepis ... [more]
A0A851F4Y4_PITSO2.720e-1047.17Protein Mdm4 (Fragment) n=1 Tax=Pitta sordida TaxI... [more]
UPI001F034E191.440e-942.31E3 ubiquitin-protein ligase Mdm2-like isoform X1 n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 93..140
e-value: 2.0E-10
score: 40.3
NoneNo IPR availablePANTHERPTHR13844:SF39coord: 91..145
NoneNo IPR availablePANTHERPTHR13844BRG-1 ASSOCIATED FACTOR 60 BAF60coord: 91..145
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 82..141
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 87..146
e-value: 1.1E-19
score: 71.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66852contigH-elongata_contig66852:2132..2572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66852.14286.1mRNA_H-elongata_contig66852.14286.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66852 2132..3231 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66852.14286.1 ID=prot_H-elongata_contig66852.14286.1|Name=mRNA_H-elongata_contig66852.14286.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
PVGSWSGSSGGGSSVSTGSAVGGSLPRVEARPPPRKRRSFGGSDKLDSNG
EDPPEASSPDHGSASFFEALPAEEVEQRLKAFHKGPLHEDFHLCCVCMDR
PRDAALIHGKTSHQACCYDCALELFERGLPCPCCRQSIAHVVKNFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD