prot_H-elongata_contig66241.14222.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66241.14222.1
Unique Nameprot_H-elongata_contig66241.14222.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
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BLAST of mRNA_H-elongata_contig66241.14222.1 vs. uniprot
Match: D7G273_ECTSI (Transmembrane protein 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G273_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 6.850e-23
Identity = 55/120 (45.83%), Postives = 76/120 (63.33%), Query Frame = 0 
Query:    1 QISHLQASCKDPRESTILIISDERCIGSDFWSTVCGPNELLVFRRYPFNLPSPENAPRVAYSPLGPRDTFPFIERSTQLQRLASSRNVFFNLQVSSGTSPRRDRVINITNIYAFEHPEAQ 120
            Q SHLQASC+DP E+T+L+ISDE C   +    +       V R +PFN P  +  PR A+ PLGPRDTFPF+  S   + LASSR++ FNLQV   TS RR  +++I + Y  ++P+ +
Sbjct:  165 QASHLQASCEDPTETTVLVISDETCELPELPPGLPPSCRANVVRVFPFNKPRTDGLPRNAFLPLGPRDTFPFV--SEDRRPLASSRSLLFNLQVRPDTSDRRAELVDIASQYESDNPDLE 282
[Close]
BLAST of mRNA_H-elongata_contig66241.14222.1 vs. uniprot
Match: D7G272_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G272_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.440e-22
Identity = 57/117 (48.72%), Postives = 69/117 (58.97%), Query Frame = 0 
Query:    1 QISHLQASCKDPRESTILIISDERCIGSDFWSTVCGPNELLVFRRYPFNLPSPENAPRVAYSPLGPRDTFPFIERSTQLQRLASSRNVFFNLQVSSGTSPRRDRVINITNIYAFEHP 117
            Q SHLQASC+DP E+T+LIISDE C  S     +       V R +PFN       PR  Y PLGPRDTFPF+  S   + LASSR++FFNLQV   T  RR  +I   +IY   +P
Sbjct:  105 QASHLQASCEDPTETTVLIISDETCRTSGLPVGIPPSCRSNVVRAFPFNQDRANEEPRRPYLPLGPRDTFPFV--SDDRRPLASSRSLFFNLQVRPETQGRRGELIETASIYQLSNP 219
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66241.14222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G273_ECTSI6.850e-2345.83Transmembrane protein 5 n=2 Tax=Ectocarpus TaxID=2... [more]
D7G272_ECTSI1.440e-2248.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66241contigH-elongata_contig66241:1374..2775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66241.14222.1mRNA_H-elongata_contig66241.14222.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66241 1374..2775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66241.14222.1 ID=prot_H-elongata_contig66241.14222.1|Name=mRNA_H-elongata_contig66241.14222.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
QISHLQASCKDPRESTILIISDERCIGSDFWSTVCGPNELLVFRRYPFNL
PSPENAPRVAYSPLGPRDTFPFIERSTQLQRLASSRNVFFNLQVSSGTSP
RRDRVINITNIYAFEHPEAQVHLS
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