prot_H-elongata_contig65944.14179.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65944.14179.1
Unique Nameprot_H-elongata_contig65944.14179.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length227
Homology
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 2.320e-99
Identity = 185/259 (71.43%), Postives = 194/259 (74.90%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGY------------------------------KSGDPEDGRVGAISDGEASG--TVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRVAEIEAQVRQQHA 227
            P  GKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAAS                                 + G  E          +  G  TVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQ KVLRAITRKF FE +   +S  GVDLAE+VR+ IP  FTGADLSAVASNALQLALRRRVAEIEA+V + +A
Sbjct:  846 PGTGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHRHQRHGQDESYXXXXXXXXDTVGEETVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQTKVLRAITRKFGFEEE---DSEHGVDLAEIVRDRIPPQFTGADLSAVASNALQLALRRRVAEIEAEVAETNA 1101          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: A0A836CKR6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR6_9STRA)

HSP 1 Score: 281 bits (720), Expect = 8.600e-86
Identity = 158/223 (70.85%), Postives = 171/223 (76.68%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRVAEIEAQVR 223
            P  GKTLLAKAVATECGL FFSVKGPELLDMYVGESERNVREVF QAR AAPCVLFFDELDSLAP RGRG DSGGVMDRVV+QLL+ELDG               V A +DG A   VFVIGATNRPDLLDPSL+RPGRFDRLLYLG  GD +TQ+KVL A TRKF FE+        GV LAE+ R  IP+ FTGAD+SAVAS AL  AL+RR+AE+EA  R
Sbjct:  656 PGTGKTLLAKAVATECGLAFFSVKGPELLDMYVGESERNVREVFRQARSAAPCVLFFDELDSLAPQRGRGADSGGVMDRVVSQLLSELDG---------------VSAGADGRA---VFVIGATNRPDLLDPSLLRPGRFDRLLYLGTGGDTDTQLKVLSAATRKFTFED--------GVSLAEVARA-IPATFTGADMSAVASAALMAALKRRIAEVEAAAR 851          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: W7TWL5_9STRA (Aaa atpase domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL5_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.250e-80
Identity = 147/219 (67.12%), Postives = 165/219 (75.34%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRVAEIE 219
            P  GKTLLAKAVATECGL F SVKGPELLDMYVGESERNVR+ FA+AR AAP VLFFDELDSLAP RGRG DSGGVMDRVVAQLL ELD A S+G + G  E GR G     +    VFVIGATNRPDLLD SL+RPGRFDRLLYLG + D  ++  +L+A TRKF F  D        VDL+++V   +P +FTGAD SAVA+ AL  ALRRRVAE+E
Sbjct:   55 PGTGKTLLAKAVATECGLAFLSVKGPELLDMYVGESERNVRQAFARARAAAPAVLFFDELDSLAPQRGRGSDSGGVMDRVVAQLLVELD-AVSSGERGG--EGGREGETGRQD----VFVIGATNRPDLLDSSLLRPGRFDRLLYLGNTTDAGSRRAILQAATRKFPFGED--------VDLSDVVSR-LPPNFTGADFSAVAAQALMRALRRRVAELE 257          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: A0A6H5JDF2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF2_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 2.880e-76
Identity = 144/206 (69.90%), Postives = 147/206 (71.36%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRV----------------------------------GAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDT 172
            P  GKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAAS                                               G+  D     TVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGD+ETQ KVLRAITRKF FE D+
Sbjct:  834 PGTGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXGSGGDTVGGDTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDQETQTKVLRAITRKFGFEEDS 1039          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: A0A4D9D6M2_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6M2_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.300e-75
Identity = 143/219 (65.30%), Postives = 159/219 (72.60%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRVAEIE 219
            P  GKTLLAKAVATECGL F SVKGPELLDMYVGESERNVR+ FA+AR AAP VLFFDELDSLAP RGRG DSGGVMDRVVAQLL ELD  +S        E G       G     VFVIGATNRPDLLD SL+RPGRFDRLLYLG + D  ++  +L+A TRKF F  D        VDL+++V   +P +FTGAD SAVA+ AL  ALRRRVAE+E
Sbjct:  465 PGTGKTLLAKAVATECGLAFLSVKGPELLDMYVGESERNVRQAFARARAAAPAVLFFDELDSLAPQRGRGSDSGGVMDRVVAQLLVELDAVSSG-------EGGXXXXREGGTERKDVFVIGATNRPDLLDSSLLRPGRFDRLLYLGHTTDAGSRRAILQAATRKFPFGED--------VDLSDVVSR-LPPNFTGADFSAVAAQALMRALRRRVAELE 667          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: A0A4W4HHW5_ELEEL (Peroxisomal biogenesis factor 6 n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4HHW5_ELEEL)

HSP 1 Score: 244 bits (622), Expect = 6.670e-74
Identity = 129/215 (60.00%), Postives = 158/215 (73.49%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRV 215
            P  GKTLLAKAVATEC + F SVKGPEL++MYVG+SE N+REVF +AR+AAPC++FFDELDSLAP RGR GDSGGVMDRVV+QLLAELDG  S                     SG VFVIGATNRPDLLD SL+RPGRFDRL+Y+G+  DRE+Q+++LRAI RKF+ E         GV L+E+V +  P H TGADL A+ S+A+  A++R++
Sbjct:  370 PGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENIREVFRKARVAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHS---------------------SGDVFVIGATNRPDLLDQSLLRPGRFDRLVYVGIGEDRESQLQILRAIVRKFKVE--------PGVSLSEIV-DRCPLHLTGADLYALCSDAMTSAVKRKI 554          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: A0A834AT67_9CHIR (Peroxisomal biogenesis factor 6 n=5 Tax=Laurasiatheria TaxID=314145 RepID=A0A834AT67_9CHIR)

HSP 1 Score: 240 bits (612), Expect = 8.220e-74
Identity = 129/219 (58.90%), Postives = 160/219 (73.06%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRVAEIE 219
            P  GKTLLAKAVATEC L F SVKGPEL++MYVG+SE NVREVFA+AR AAPC++FFDELDSLAP+RGR GDSGGVMDRVV+QLLAELDG  S                     +  VFVIGATNRPDLLDP+L+RPGRFD+L+++GVS DR +Q++VL AITRKF+ E+         V L  ++ ++ P   TGADL ++ S+A+  AL+RRV ++E
Sbjct:  234 PGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHS---------------------TQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSEDRASQLRVLSAITRKFKLES--------SVSLVNVL-DHCPPQLTGADLYSLCSDAMTAALKRRVQDLE 422          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: A0A3R6XLN9_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XLN9_9STRA)

HSP 1 Score: 231 bits (590), Expect = 4.300e-73
Identity = 125/219 (57.08%), Postives = 149/219 (68.04%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRVAEIE 219
            P  GKTLLAKA+ATEC + F SVKGPELLDMY+GESE+NVR VF  AR A PC+LFFDELDSLAP RGRG DSGGVMDRVV+QLL E+D   S                        VFV+GATNRPDL++ +L+RPGRFDRLLYLG+  D+ TQ+KV++A+TRKF+   D D N+         V    P H+TGAD  A+ S AL LA++ RVA IE
Sbjct:    2 PGTGKTLLAKAIATECNMNFISVKGPELLDMYIGESEKNVRHVFQMARNARPCILFFDELDSLAPMRGRGSDSGGVMDRVVSQLLTEIDSNLS-----------------------QVFVVGATNRPDLIETALLRPGRFDRLLYLGICNDKPTQLKVVQALTRKFQLAPDVDLNA---------VVALCPFHYTGADFYALCSMALSLAIKDRVAAIE 188          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: UPI0005233B09 (peroxisome assembly factor 2-like n=2 Tax=Neognathae TaxID=8825 RepID=UPI0005233B09)

HSP 1 Score: 232 bits (591), Expect = 5.870e-73
Identity = 124/219 (56.62%), Postives = 158/219 (72.15%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRVAEIE 219
            P  GKTLLAKAVAT C + F SVKGPEL++MYVG+SE NVR VFA+AR AAPC++FFDELDSLAP+RGR GDSGGVMDRVV+QLLAELDG  S                     +  VFVIGATNRPDLLDP+L+RPGRFD+L+Y+G++ DRE+Q++VL A+TRKF+ +          V+L  ++ E  P+  TGAD+ A+ S+A+  A++R+V  IE
Sbjct:   48 PGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCIVFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHS---------------------TREVFVIGATNRPDLLDPALLRPGRFDKLVYVGINEDRESQLQVLSAVTRKFQLD--------PSVNLTTVL-EKCPTQLTGADIYALCSDAMMCAVKRKVEWIE 236          
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Match: A0A2D4PIH3_MICSU (AAA domain-containing protein (Fragment) n=1 Tax=Micrurus surinamensis TaxID=129470 RepID=A0A2D4PIH3_MICSU)

HSP 1 Score: 231 bits (588), Expect = 9.800e-73
Identity = 124/215 (57.67%), Postives = 155/215 (72.09%), Query Frame = 0
Query:    1 PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGDPEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLSAVASNALQLALRRRV 215
            P  GKTLLAKAVATEC + F SVKGPEL+ MYVG+SE NVREVFA+AR AAPC++FFDELDSLAP+RGR GDS GVMDRVV+QLLAELDG  S                     S  VFVIGATNRPDLLD +L+RPGRFD+L+Y+G++ DR++Q++VL AITRKF+ +          V+L  ++ +  P+  TGADL A+ S+A+  A+RR+V
Sbjct:   81 PGTGKTLLAKAVATECTMTFLSVKGPELISMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSQGVMDRVVSQLLAELDGLHS---------------------SQDVFVIGATNRPDLLDSALLRPGRFDKLVYVGINEDRDSQLQVLSAITRKFKLD--------PAVNLLSVL-DRCPAQLTGADLYALCSDAMMFAIRRKV 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65944.14179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLK3_ECTSI2.320e-9971.43AAA ATPase domain-containing protein n=1 Tax=Ectoc... [more]
A0A836CKR6_9STRA8.600e-8670.85P-loop containing nucleoside triphosphate hydrolas... [more]
W7TWL5_9STRA1.250e-8067.12Aaa atpase domain-containing protein (Fragment) n=... [more]
A0A6H5JDF2_9PHAE2.880e-7669.90AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A4D9D6M2_9STRA2.300e-7565.30AAA domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A4W4HHW5_ELEEL6.670e-7460.00Peroxisomal biogenesis factor 6 n=1 Tax=Electropho... [more]
A0A834AT67_9CHIR8.220e-7458.90Peroxisomal biogenesis factor 6 n=5 Tax=Laurasiath... [more]
A0A3R6XLN9_9STRA4.300e-7357.08AAA domain-containing protein (Fragment) n=1 Tax=A... [more]
UPI0005233B095.870e-7356.62peroxisome assembly factor 2-like n=2 Tax=Neognath... [more]
A0A2D4PIH3_MICSU9.800e-7357.67AAA domain-containing protein (Fragment) n=1 Tax=M... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 1..150
e-value: 3.0E-7
score: 40.1
NoneNo IPR availableGENE3D1.10.8.60coord: 151..227
e-value: 7.0E-8
score: 34.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1..147
e-value: 3.7E-46
score: 159.1
NoneNo IPR availablePANTHERPTHR23077:SF9PEROXISOME ASSEMBLY FACTOR 2coord: 4..223
NoneNo IPR availablePANTHERPTHR23077AAA-FAMILY ATPASEcoord: 4..223
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 4..146
e-value: 4.9E-37
score: 127.3
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 118..136
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65944contigH-elongata_contig65944:643..3265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65944.14179.1mRNA_H-elongata_contig65944.14179.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65944 643..3265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65944.14179.1 ID=prot_H-elongata_contig65944.14179.1|Name=mRNA_H-elongata_contig65944.14179.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp
PPPGKTLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLA
APCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGYKSGD
PEDGRVGAISDGEASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSG
DRETQIKVLRAITRKFRFENDTDGNSNGGVDLAEMVRENIPSHFTGADLS
AVASNALQLALRRRVAEIEAQVRQQHA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase