prot_H-elongata_contig6512.14102.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6512.14102.1 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE) HSP 1 Score: 221 bits (563), Expect = 1.450e-59 Identity = 175/391 (44.76%), Postives = 198/391 (50.64%), Query Frame = 0
Query: 140 GGRPPLVRKRSLTVALDADPGGPALCPSPRGRRRSVDKALDTKDGV-------PDVSSAGV-ESPSHPPRVLPAPAVGNNGVAVVGGSSGGSGGGCFSPHPAYPSPRAGIICGVGGLVGGVGPRECSLSSPPHDRFHHH-PGHTM-------------------------------------DVEWIPNETTHTAALSASTAATPSPVPSASSA--------LTGSGLGCPQSPFAPSPGHEYLRIGSM--RGAPPQSPSPRRAPPSPAQAPGSAGLRRPGTRRLDGRRLARRV--HNLGAGKGAYVGGGAGEIISGGGGGVGGTYESDYD--------------------SDLSDLSGYSAVGSLERQLQQDTFFELDEALWVVVTRREV 452
GGRPPLVRKRSLTVA+DADPGGP +CPSPRGRRRSV+ DTKD PD ++ + ESPS PPR++ AVGN+GVAVVGG G CFSP +YPS G GG RE L S HD GH M DVEWIPNE + TPSPV S +SA + +G P SPF PSPG EY R+G + RG+ SPSPRRAPPSPA APGSAG+RR GTRRL G R A R G KG YVG G S++S S YSA+GSLERQLQQDTFFELDE+LW VVTRRE+
Sbjct: 304 GGRPPLVRKRSLTVAMDADPGGPVMCPSPRGRRRSVEGVFDTKDSCTSGGGSNPDGTTTRLLESPSRPPRLM---AVGNSGVAVVGGGVGA----CFSPLVSYPSSH-------GDRAGGG--REYPLRSQAHDNLSVRVSGHAMAGGGSNVNPVETKTDSSSAGVGLETAAAGACVSKNPMDVEWIPNENAQAGGI----LPTPSPVTSVASAPPAMVQPSANANAMGRPPSPFPPSPGREYRRVGGVLSRGST-HSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSATRGVRSRPGVSKGVYVGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREI 673
BLAST of mRNA_H-elongata_contig6512.14102.1 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.610e-52 Identity = 156/343 (45.48%), Postives = 178/343 (51.90%), Query Frame = 0
Query: 155 LDADPGGPALCPSPRGRRRSVDKALDTKDGV-------PDVSSAGV-ESPSHPPRVLPAPAVGNNGVAVVGGSSGGSGGGCFSPHPAYPSPRAGIICGVGGLVGGVGPRECSLSSPPHDRFHHHPGHTMDVEWIPNETTHTAALSASTAATPSPVPSASSALTGSGLGCPQSPFAPSPGHEYLRIGSM--RGAPPQSPSPRRAPPSPAQAPGSAGLRRPGTRRLDGRRLARRV--HNLGAGKGAYVGGGAGEIISGGGGGVGGT------------------------------YESDYDSDLSDLSGYS---AVGSLERQLQQDTFFELDEALWVVVTRREV 452
+DADPGGPA+CPSPRGRRRSV+ DTKD PD ++ + ESPS PPR++ AVGNNGVAVVGG GG G CFSP +YPS G RE L S HD+F S PSA++ + +G P SPF PSPG EY R G + RG+ SPSPRRAPPSPA APGSAG+RR GTRRL G R A R G KG YVG G YESDYDSDLS++S YS A+GSLERQLQQDTFFELDE+LW VVTRRE+
Sbjct: 1 MDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDGTTTRLLESPSRPPRLM---AVGNNGVAVVGGGVGGGVGTCFSPLVSYPSSHGDRASGG---------REYPLRSQAHDKF-------------------------------SVTPSANA----NAMGRPPSPFPPSPGREYRRAGGVLSRGST-HSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSRPGVSKGVYVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYESDYDSDLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREI 295 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6512.14102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6512.14102.1 ID=prot_H-elongata_contig6512.14102.1|Name=mRNA_H-elongata_contig6512.14102.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=452bpback to top |