prot_H-elongata_contig62951.13873.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62951.13873.1
Unique Nameprot_H-elongata_contig62951.13873.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
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BLAST of mRNA_H-elongata_contig62951.13873.1 vs. uniprot
Match: D7FS78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS78_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 3.160e-27
Identity = 57/89 (64.04%), Postives = 74/89 (83.15%), Query Frame = 0 
Query:    7 LGQFLSALIATMSISAASLDDRGVNLPSLLNCMSYAMLMLVFFIPTVIS--RGTLKLSLPAWRYAVYSLIDVEANTLAVWAYRYTTITS 93
            LGQ LS LIA MSISAASLDDRG+++PS +N ++Y+ +M +FF P + S  +G+L+L+LP WRYA Y+L+DVEANTLAV AYRYT+ITS
Sbjct:   59 LGQILSLLIAMMSISAASLDDRGISIPSFVNFVNYSFIMALFFFPMLFSWFQGSLQLTLPWWRYAFYALVDVEANTLAVLAYRYTSITS 147
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BLAST of mRNA_H-elongata_contig62951.13873.1 vs. uniprot
Match: A0A836CB98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB98_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.300e-9
Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 0 
Query:    4 SIGLGQFLSALIATMSISAASLDDRGVNLPSLLNCMSYAMLMLVFFIPTVISRGTLKLSLPAWRYAVYSLIDVEANTLAV 83
            ++ LGQ +S  I+  SI+AASL DRG+N P  ++ + Y  L         + R    L LP WRYAVY+L+DVEAN L V
Sbjct:   32 NLALGQVISFFISGASIAAASLSDRGMNFPVFMSFIVYLCLC------GYLVRVRRPLRLPVWRYAVYALMDVEANFLVV 105
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BLAST of mRNA_H-elongata_contig62951.13873.1 vs. uniprot
Match: UPI001B88B024 (solute carrier family 35 member F1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B024)

HSP 1 Score: 59.3 bits (142), Expect = 2.900e-8
Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 0 
Query:    1 FWGSIGLGQFLSALIATMSISAASLDDRGVNLPSLLNCMSYAMLMLVFFIPTVISRGTLK-------LSLPAWRYAVYSLIDVEANTLAVWAYRYTTITS 93
            F  ++ LGQFLS L+    I    L   GV+ P+  + ++Y +L LVF   TVI     K       L    W+Y + SL+DVEAN LA+ AY YTT+TS
Sbjct:   46 FLKALLLGQFLSLLLCGTGIFTGLLAQEGVHTPAAQSFVNYVLLCLVF---TVILACRYKERTFGFLLKNYWWKYLLLSLVDVEANYLAIKAYSYTTVTS 142
[Close]
BLAST of mRNA_H-elongata_contig62951.13873.1 vs. uniprot
Match: A0A7S3K4V2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4V2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.520e-8
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0 
Query:    7 LGQFLSALIATMSISAASLDDRGVNLPSLLNCMSYAMLMLVFFIPTVISRGTLKLSLPAWRYAVYSLIDVEANTLAVWAYRYTTITS 93
            LGQF +   A    +A++L  RG+N+P+L N  SYA+L  +F +     +         +++   +LIDVEAN LAVWAY +T++TS
Sbjct:   18 LGQFAAICTAATGAAASTLARRGINVPTLQNMPSYALLSTLFLLQKDKEKPD-----HWYKWFFLALIDVEANCLAVWAYSHTSLTS 99
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62951.13873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FS78_ECTSI3.160e-2764.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CB98_9STRA1.300e-945.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001B88B0242.900e-841.00solute carrier family 35 member F1-like n=1 Tax=Gi... [more]
A0A7S3K4V2_9STRA5.520e-839.08Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009262Solute carrier family 35 member SLC35F1/F2/F6PFAMPF06027SLC35Fcoord: 2..93
e-value: 4.0E-16
score: 59.4
NoneNo IPR availablePANTHERPTHR14233:SF4ANTHOCYANIN-RELATED MEMBRANE PROTEIN 2-RELATEDcoord: 1..93
NoneNo IPR availablePANTHERPTHR14233DUF914-RELATEDcoord: 1..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableTMHMMTMhelixcoord: 5..25
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62951contigH-elongata_contig62951:1101..1943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62951.13873.1mRNA_H-elongata_contig62951.13873.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62951 1101..1943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62951.13873.1 ID=prot_H-elongata_contig62951.13873.1|Name=mRNA_H-elongata_contig62951.13873.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
FWGSIGLGQFLSALIATMSISAASLDDRGVNLPSLLNCMSYAMLMLVFFI
PTVISRGTLKLSLPAWRYAVYSLIDVEANTLAVWAYRYTTITS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009262SLC35_F1/F2/F6