prot_H-elongata_contig6289.13865.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6289.13865.1
Unique Nameprot_H-elongata_contig6289.13865.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length975
Homology
BLAST of mRNA_H-elongata_contig6289.13865.1 vs. uniprot
Match: D8LEV6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEV6_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 1.680e-70
Identity = 379/1145 (33.10%), Postives = 468/1145 (40.87%), Query Frame = 0
Query:   77 KDYASMASVAAVPSA----RDLYALR---SHAGGGRGYVSSASLHPNGSLGRVVPSA-GGGKDYASLADASAAGSRLGGGSGGDRRSGG-----------SYADQARDVRHAGRMLGAAISSGGGGRFDRGG-------------------KAPPSPPGRDQFGRERDWRGNAPNGRRVAVSVPASNGQPSVVHGSGFGTFSMA-SSMSMAGNSGVSLSSATTSNPKAFPARDSRSPV--RVGAQAPASSLSSPLTRADFVRQHSRREQRXXXXXXXXXXXXXXXXXXXXXXXXEDGRHRQPNERMKRKHGSVDRQQRSSSEHRDR-NIYLRDHHQWQLQQQHLQGSTAEGEGKRRDRRDMVGAA--------------------------------------------AAPTLV-----SNRTFRDRSSSPCAGAGADGDRKESGAPPFDQNDFSLTSSRQEKVGSTGGGGV-------MGGGYGAGTFAGLAPRVELPKSGDDPGGGNGMG-----------------------NGGFHAQREGDRNRAYPRQGVGQGQGRYSRGSVSSINEDAEASCGEADDSHDEGEVSSGGRGMGFGGRERQQDEDARVWKRDAYWGG---DFRRSS--GIDGGEGGDRAGGTGGGYRGNGNEG-----GTPGARGFIRERDRPDSPRDRSRYNPTPPQPPPMAGTDEQQGGHHDTR------------------GDRQDKRLDDA-GVTGG----------HKRPRSPESVGMDLDGDSPSPPPSRHQDPRSQDSRGTGGNYSELCSNRSVNHVPKSNRHGRSSPPAD--SRHAAERTHNPWPKPPPLQDTAPNGPGG----RPQHYQSRHSYRHNPNQSSDAGGATGP------------------------------------RPGRSSSHNVALADRNGSRLGPSVRPSLAPMAGQGNSCRGSPHARRGSPLQAXXXXXXXXXX------------------------------------KLTHVSPKTFSPYGARSSPISSQGTGPDAGDGTAGGSVAGVGES-----------NGWAAGRRARGPAITDRLVSLKAEFLELHDMLLESDFQWEQSQKFCEMLKVQLDQLMITPHRNRGALVQPL 972
            KDYASMAS+++ PS      + + LR   S  G GR   S +SLH NG++ R +P+A   GKDYASLA     G     GSG    +G             YADQARDVR+AGR LGAAIS        RG                    KAPPSPPGRDQFGRERDWR +A NGRR   S P  NGQP VVHGSGFGTFSMA  + S  G +GV+ S   +S   + P RDSRSPV  R G        ++P TRAD VR HS R+++                        +DGR        +++  +VD++QR S E RD+   +  DH                                                                           AAP+         +T  D S SP     +      + A P  +N+ + T     +  S G           M GG G GT AGL P ++ P                                    NGG  A+RE DR R +PR  +G G+G  +R   +  + +     G    S+  G  SSGGR       + +  +    WKRD Y  G   D  R S  G D G GGDR    GG YRGNG+         PG RG +RERDRPDSPRDR RYNPTPPQPPP+  + E   G                       GD QD+      G  GG          +KRPRSPE V MDL+ DSPSPP  R Q+   QD R  G NY++     S NH P  +  GRS+PP D  SR+A E                  G GG    R QH Q  H   + P                                                R GR++ H     +R G      V P L P A          H  RGSPL        XXXX                                     +   SP    P+G+RSSP+S Q  G + G G+A    AG G+S                    R P ITDRL+SLKAEFLELHDML+ESDFQWE+SQ+FCE+LK+QLDQLM+ PHR+R ++  P+
Sbjct:  193 KDYASMASMSS-PSGGGVNNNAFPLRNPGSVPGRGRFMSSPSSLHANGAVARPMPAAVSAGKDYASLASGLPPG-----GSGRGSVAGXXXXXXXXXXXXGYADQARDVRNAGRALGAAISGRRADSLSRGNXXXXXXXXXXXXXXXXXSSKAPPSPPGRDQFGRERDWRSSASNGRRQGASPP--NGQPPVVHGSGFGTFSMALGNSSGEGATGVAPSK-LSSRSSSTPGRDSRSPVGSRGGXXXXXXPTAAPPTRADLVRAHSSRQRQRQLQEGASL---------------QDGR-------KQKQVNNVDQRQRLSPERRDQAENHASDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPSTAFASAPGKKTSSDGSKSPHPAGPST-----AVAAPVQENNGAPTPLSPSRHSSNGXXXXXXXXXXKMAGGSGLGTLAGLTPTMDRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVNGGPPAERESDRPRPHPR--LGLGEGLLARNEPAGGDSEVSTQGG----SNQNGRESSGGRRPSVVDLQERDADGRNAWKRDGYRAGGPGDSHRPSMGGGDRGVGGDR----GGPYRGNGHXXXXXXXSLPGGRGVVRERDRPDSPRDRGRYNPTPPQPPPLMSSAEHSHGSGTLSVSARRASLGYPLGGGRNGGDWQDRNAGGMPGQMGGXXXXXXXXXXYKRPRSPEPVAMDLEEDSPSPPRGRGQEFLKQDFR--GNNYAD-----SRNHRPGWD--GRSTPPGDPSSRYAMEG----------------GGSGGGNHARHQHQQGMHPLANGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGRLGRTTGHPPMHPERGG------VGPRLGPNA----------HQNRGSPLVGGSVGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRSPLSMHSASPLALGPHGSRSSPVSGQ-KGGEEGRGSA---AAGDGDSVAXXXXXXXXXXXXXXXXXXRPPVITDRLISLKAEFLELHDMLMESDFQWEESQRFCEVLKLQLDQLMLVPHRHRESMASPI 1246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6289.13865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEV6_ECTSI1.680e-7033.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6289contigH-elongata_contig6289:4388..9610 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6289.13865.1mRNA_H-elongata_contig6289.13865.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6289 4388..9610 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6289.13865.1 ID=prot_H-elongata_contig6289.13865.1|Name=mRNA_H-elongata_contig6289.13865.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=975bp
SSSSGSRGSSRRRGSNHSGSRPPPRVMPMASPHFGKHGSGNGMGVIGMGT
GSVTMGGISGVSMVIGGGVGVNVGVSKDYASMASVAAVPSARDLYALRSH
AGGGRGYVSSASLHPNGSLGRVVPSAGGGKDYASLADASAAGSRLGGGSG
GDRRSGGSYADQARDVRHAGRMLGAAISSGGGGRFDRGGKAPPSPPGRDQ
FGRERDWRGNAPNGRRVAVSVPASNGQPSVVHGSGFGTFSMASSMSMAGN
SGVSLSSATTSNPKAFPARDSRSPVRVGAQAPASSLSSPLTRADFVRQHS
RREQRQRQHERRLSTSSSSSSSSSPSSSSEDGRHRQPNERMKRKHGSVDR
QQRSSSEHRDRNIYLRDHHQWQLQQQHLQGSTAEGEGKRRDRRDMVGAAA
APTLVSNRTFRDRSSSPCAGAGADGDRKESGAPPFDQNDFSLTSSRQEKV
GSTGGGGVMGGGYGAGTFAGLAPRVELPKSGDDPGGGNGMGNGGFHAQRE
GDRNRAYPRQGVGQGQGRYSRGSVSSINEDAEASCGEADDSHDEGEVSSG
GRGMGFGGRERQQDEDARVWKRDAYWGGDFRRSSGIDGGEGGDRAGGTGG
GYRGNGNEGGTPGARGFIRERDRPDSPRDRSRYNPTPPQPPPMAGTDEQQ
GGHHDTRGDRQDKRLDDAGVTGGHKRPRSPESVGMDLDGDSPSPPPSRHQ
DPRSQDSRGTGGNYSELCSNRSVNHVPKSNRHGRSSPPADSRHAAERTHN
PWPKPPPLQDTAPNGPGGRPQHYQSRHSYRHNPNQSSDAGGATGPRPGRS
SSHNVALADRNGSRLGPSVRPSLAPMAGQGNSCRGSPHARRGSPLQAGHG
TRPQGSPKLTHVSPKTFSPYGARSSPISSQGTGPDAGDGTAGGSVAGVGE
SNGWAAGRRARGPAITDRLVSLKAEFLELHDMLLESDFQWEQSQKFCEML
KVQLDQLMITPHRNRGALVQPLTR*
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