prot_H-elongata_contig62572.13829.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62572.13829.1
Unique Nameprot_H-elongata_contig62572.13829.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
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BLAST of mRNA_H-elongata_contig62572.13829.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 9.220e-7
Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:    1 MVNLKDDLTGNDTAMLYRFWPSAKRTKEQFPIILSGQKELQ 41
            MV+LKD+L+G D  +LYRFWPSAKR K  F I+L GQ  LQ
Sbjct:  794 MVDLKDELSGRDAGLLYRFWPSAKRAKRPFSIMLPGQMYLQ 834
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BLAST of mRNA_H-elongata_contig62572.13829.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.480e-5
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:    1 MVNLKDDLTGNDTAMLYRFWPSAKRTKEQFPIILSGQ 37
            MV+LKD+L+G D  +LY FWPSAKR K  F I+L GQ
Sbjct: 2749 MVDLKDELSGRDAGLLYHFWPSAKRAKRPFSIMLPGQ 2785
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62572.13829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJG4_ECTSI9.220e-763.41RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K688_9PHAE1.480e-562.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62572contigH-elongata_contig62572:2135..2814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62572.13829.1mRNA_H-elongata_contig62572.13829.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62572 2135..3231 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62572.13829.1 ID=prot_H-elongata_contig62572.13829.1|Name=mRNA_H-elongata_contig62572.13829.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MVNLKDDLTGNDTAMLYRFWPSAKRTKEQFPIILSGQKELQESLTARQAW
EANSAGRDEEFPEEEEEEEESEGDHQHSQGQSENGVGGVHVAAAGGDRGA
GRGDGDDSRPVGVAAETAASSSLSRGSNESAAADPAQSGGQDNDSSILGG
GVTSAG
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