prot_H-elongata_contig61595.13710.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61595.13710.1
Unique Nameprot_H-elongata_contig61595.13710.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length253
Homology
BLAST of mRNA_H-elongata_contig61595.13710.1 vs. uniprot
Match: D7FJF5_ECTSI (Galectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF5_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 2.010e-84
Identity = 139/246 (56.50%), Postives = 173/246 (70.33%), Query Frame = 0
Query:   11 GTGSKGPAAAATAPARS---PVPIDALTRTKMVLMEKKRQAAAAGLTRVCSAGAGGLKKAKIKIAGALPSAATVMLDPLKYPASGFLLTQEFHSFERAEDAGDQDYVPTEPLVKALKKFGLAEDGNGDGGSVGASKAQFNETLVIRLTVPPHSQSWGINICPSEHKDFSEILFHFNPRRRFVAMNNREDNVWGQQEKHMPGPKWPDLFNVSIHLAVQIDDAGFHIAIDGKYCTTFVKRKELPMNGE 253
            G G  G AAA    A     P P DA++R KM+L EKKR+AAA   +   S  AG L+KAKI  A   PS+    LDP+KYPASG LL  E+ +F   E  G++ Y P +PLV+ LK FG+A+  +G   + G +K QF+ETLV+R T+P HS SW INICP +HKDF EILFHFNPRRRFVAMNNRE N+WGQQEKHM   +WP++FNVSI++AVQID AGFH+A+DGKYC TF  R ++P +GE
Sbjct:  119 GDGKPGIAAATVPQAEEKPGPAPTDAVSRAKMIL-EKKRKAAARFGSGASSGAAGVLRKAKITKATGTPSS-NPRLDPIKYPASGLLLRDEYRTFAEIEKDGERVYEPLDPLVRLLKNFGIADSNSG---ADGVAKKQFHETLVMRATIPAHSTSWAINICPKDHKDFEEILFHFNPRRRFVAMNNREGNIWGQQEKHMLSTRWPEVFNVSINVAVQIDAAGFHVAVDGKYCATFAHRTKVPPSGE 359          
BLAST of mRNA_H-elongata_contig61595.13710.1 vs. uniprot
Match: A0A6H5JWU1_9PHAE (Galectin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU1_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 3.040e-72
Identity = 104/167 (62.28%), Postives = 127/167 (76.05%), Query Frame = 0
Query:   87 KYPASGFLLTQEFHSFERAEDAGDQDYVPTEPLVKALKKFGLAEDGNGDGGSVGASKAQFNETLVIRLTVPPHSQSWGINICPSEHKDFSEILFHFNPRRRFVAMNNREDNVWGQQEKHMPGPKWPDLFNVSIHLAVQIDDAGFHIAIDGKYCTTFVKRKELPMNGE 253
            KYPASG LL  E+ +F   E  G++ Y P +PLV+ LK FG+A+  +G  G V   K QF+ETLV+R T+P HS SW INICP +HK+F EILFHFNPRRRFVAMNNRE N+WGQQEKHM   +WP++FNVSI+LAVQID AGFH+A+DGKYC TF  R ++P N E
Sbjct:   13 KYPASGLLLRDEYRTFAEIEKEGERAYEPLDPLVRLLKNFGIADSNSGADGVV---KKQFHETLVMRATIPAHSTSWAINICPKDHKNFEEILFHFNPRRRFVAMNNREGNIWGQQEKHMLSTRWPEVFNVSINLAVQIDAAGFHVAVDGKYCATFAHRTKVPPNDE 176          
BLAST of mRNA_H-elongata_contig61595.13710.1 vs. uniprot
Match: A0A835YJA2_9STRA (Galectin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA2_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.400e-21
Identity = 65/216 (30.09%), Postives = 103/216 (47.69%), Query Frame = 0
Query:   41 LMEKKRQAAAAGLTRVCSAGAGGLKKAK-IKIAGALPSAATVMLDPLKYPASGFLLTQEFHSFERAEDAGDQDYVPTEP---LVKALKKFGLAEDGNGDGGSVGASKAQFNETLVIRLTVPPHSQSWGINICPSEHKDFSEILFHFNPRRR----FVAMNNREDNVWGQQEKHMPGPKWPDLFNVSIHLAVQIDDAGFHIAIDGKYCTTFVKRKEL 248
            ++++KR+A  A   R  S GA   K+AK + +AG   S     ++   +P SG +               +QD+ PT+    LV  L  F L +                 +TLV+R+TVP  S  WGI++CP +H DF  +L+HFNPR +     +  N+R D  W          ++P +F ++   A+QID  GFH+ + G Y  +F  R+ +
Sbjct:    1 MLQEKREAQQAAAARASSFGAPAPKRAKFVTVAGKTVS---TEINKDAFPVSGLVW--------------NQDWDPTQETARLVVPLTDFALDQ----------------KQTLVLRMTVPDSSDKWGISLCPRDHADFKNVLYHFNPRSKERGGILVQNSRRDGQWEHAVTDRLN-EFPAMFGLTFDTAIQIDTWGFHVTLAGDYQLSFKHRRPI 182          
BLAST of mRNA_H-elongata_contig61595.13710.1 vs. uniprot
Match: A0A7S0GIA8_9STRA (Galectin (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIA8_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.450e-17
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 0
Query:  141 ASKAQFNETLVIRLTVPPHSQSWGINICPSEHKDFSEILFHFNPRRRF----VAMNNREDNVWGQQEKHMPGPKWPDLFNV-SIHLAVQIDDAGFHIAIDGKYCTTFVKRKELP 249
            A + Q N TL I+   PP S+ + INI    H+DF ++LFHFNPR+R     + +N R+D +WGQ    +P    P +F   S  L VQ++  GF + ID K+C     R +LP
Sbjct:  228 AMRGQGNNTLAIKFAAPPESERFSINIAGPGHRDFFDVLFHFNPRQRHKGGQLVVNERQDGIWGQGVA-VPLSTLPLIFGQNSCTLTVQVNGGGFDVFIDEKHCARLEHRTQLP 340          
BLAST of mRNA_H-elongata_contig61595.13710.1 vs. uniprot
Match: A0A7S4K6P9_9STRA (Galectin n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6P9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.200e-13
Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 0
Query:  138 SVGASKAQFNETLVIRLTVPPHSQSWGINICPSEHKDFSEILFHFNPRRRF----VAMNNREDNVWGQQEKHMPGPKWPDLFNV-SIHLAVQIDDAGFHIAIDGKYCTTFVKRKELPMN 251
            S  A     N TL ++   P  S+ + +NI    H+D+ +ILFHFNPR+R     V +N++++ +WG    ++P  + P +F   S+ L +QI   G+ + ID K+C     R +LP N
Sbjct:  250 SAQAQAGAGNNTLAVKFMAPEDSRRFSLNIAGPGHRDYHDILFHFNPRQREKGGQVVINDKQEGIWGSAV-NVPLSQCPIIFGQPSMTLIIQITGDGYDVFIDNKHCARLEHRTQLPPN 367          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61595.13710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJF5_ECTSI2.010e-8456.50Galectin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5JWU1_9PHAE3.040e-7262.28Galectin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID... [more]
A0A835YJA2_9STRA7.400e-2130.09Galectin n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
A0A7S0GIA8_9STRA4.450e-1739.47Galectin (Fragment) n=1 Tax=Proboscia inermis TaxI... [more]
A0A7S4K6P9_9STRA2.200e-1333.61Galectin n=3 Tax=Odontella aurita TaxID=265563 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001079Galectin, carbohydrate recognition domainPFAMPF00337Gal-bind_lectincoord: 147..246
e-value: 8.1E-9
score: 35.1
IPR001079Galectin, carbohydrate recognition domainPROSITEPS51304GALECTINcoord: 136..253
score: 14.679
NoneNo IPR availableGENE3D2.60.120.200coord: 142..251
e-value: 7.3E-16
score: 59.8
NoneNo IPR availablePANTHERPTHR11346:SF147GALECTINcoord: 148..249
NoneNo IPR availablePANTHERPTHR11346GALECTINcoord: 148..249
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 146..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61595contigH-elongata_contig61595:13..1673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61595.13710.1mRNA_H-elongata_contig61595.13710.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61595 13..1703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61595.13710.1 ID=prot_H-elongata_contig61595.13710.1|Name=mRNA_H-elongata_contig61595.13710.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp
MSAPRRIGDQGTGSKGPAAAATAPARSPVPIDALTRTKMVLMEKKRQAAA
AGLTRVCSAGAGGLKKAKIKIAGALPSAATVMLDPLKYPASGFLLTQEFH
SFERAEDAGDQDYVPTEPLVKALKKFGLAEDGNGDGGSVGASKAQFNETL
VIRLTVPPHSQSWGINICPSEHKDFSEILFHFNPRRRFVAMNNREDNVWG
QQEKHMPGPKWPDLFNVSIHLAVQIDDAGFHIAIDGKYCTTFVKRKELPM
NGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001079Galectin_CRD
IPR013320ConA-like_dom_sf