prot_H-elongata_contig60897.13630.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60897.13630.1
Unique Nameprot_H-elongata_contig60897.13630.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: D7FVF3_ECTSI (GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF3_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 2.580e-40
Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 0
Query:    1 MREKTFVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            MR+KTFVEALRAFLKEF+LPGEAQCIDRLMEAFA Q +EQG             + S +HPFVNADAAFTMAFSAIMLNTDLHNPQI DHRRM+LDDFIRNNR
Sbjct:  783 MRDKTFVEALRAFLKEFRLPGEAQCIDRLMEAFAGQQYEQG-------------KDSGQHPFVNADAAFTMAFSAIMLNTDLHNPQIQDHRRMTLDDFIRNNR 872          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: A0A6H5JJL6_9PHAE (SEC7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL6_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 2.580e-40
Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 0
Query:    1 MREKTFVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            MR+KTFVEALRAFLKEF+LPGEAQCIDRLMEAFA Q +EQG             + S +HPFVNADAAFTMAFSAIMLNTDLHNPQI DHRRM+LDDFIRNNR
Sbjct:  801 MRDKTFVEALRAFLKEFRLPGEAQCIDRLMEAFAGQQYEQG-------------KDSGQHPFVNADAAFTMAFSAIMLNTDLHNPQIQDHRRMTLDDFIRNNR 890          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: A0A836CJX6_9STRA (Sec7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.280e-27
Identity = 60/102 (58.82%), Postives = 69/102 (67.65%), Query Frame = 0
Query:    2 REKTFVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            R+  F +ALR FLKEF+LPGEAQCIDRLMEAFA +   Q                  +HPF +ADAAF +AFS IMLNTD HNPQI D +RMS DDF+RNNR
Sbjct:  755 RDTLFEDALRRFLKEFRLPGEAQCIDRLMEAFACEYFRQ---------------CKGQHPFADADAAFILAFSIIMLNTDRHNPQIRDDKRMSKDDFVRNNR 841          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: A0A7S1UXM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UXM8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.310e-25
Identity = 55/99 (55.56%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    6 FVEALRAFLKEFKLPGEAQCIDRLMEAFARQLH-EQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            F  ALR FL +F+LPGEAQCIDRLMEAF+ +L+ +Q             G+ S++ PF +ADA F MAFS IMLNTDLHNP + D +RM+L+ F+RNNR
Sbjct:  218 FSVALRKFLAKFRLPGEAQCIDRLMEAFSAELYAQQQGGVGSKQPEDDGGDDSKKLPFNSADAVFAMAFSTIMLNTDLHNPGMKDEKRMTLEQFVRNNR 316          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: A0A7S3PZD4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 5.420e-24
Identity = 56/98 (57.14%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    6 FVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            F  ALRAFL  F+LPGEAQCIDRLMEAFA +LHEQ              E      F+++D+ F +AFS IMLNTDLHNP I D RRM+ ++FIRNNR
Sbjct:  678 FSSALRAFLLRFRLPGEAQCIDRLMEAFAVRLHEQNH------------EDEAHSIFMSSDSIFVLAFSTIMLNTDLHNPTIKDDRRMTTEEFIRNNR 763          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: A0A7R9YE87_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE87_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.670e-22
Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 0
Query:    5 TFVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGXXXXXXXXXXXXGEASRRH-------------------------PFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            TF  ALR +L+ F+LPGEAQCIDRLME+FA+QL +Q             G A   H                         PFV+ADAAF ++FS IMLNTDLHNP + +H+RM L++F RNNR
Sbjct:  675 TFHHALRTYLEGFRLPGEAQCIDRLMESFAKQLFDQ--WSSLPRPDGIEGSAPGNHAYDSDPDADNASTKTSIGDDAFFANPFVDADAAFVLSFSTIMLNTDLHNPNLPEHKRMKLEEFKRNNR 796          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: B8C0S3_THAPS (Guanyl nucleotide exchange factor (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0S3_THAPS)

HSP 1 Score: 100 bits (248), Expect = 2.200e-22
Identity = 53/102 (51.96%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    2 REKTFVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            R  +F +ALR FL  F+LPGEAQCIDRLMEAFA +L                       PF +ADA F +AFS IMLNTDLHNP + D +RM++D F+RNNR
Sbjct:  320 RGMSFSDALRVFLSRFRLPGEAQCIDRLMEAFAARLRTDSIF-----------------PFKSADACFILAFSTIMLNTDLHNPNMDDAKRMTIDQFVRNNR 404          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: A0A1Z5K2I7_FISSO (SEC7 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2I7_FISSO)

HSP 1 Score: 100 bits (248), Expect = 2.280e-22
Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    5 TFVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            TF  ALR FL +F+LPGEAQCIDR+ME+F+++L+ Q             GE S    F +ADA F +AFS IMLNTDLHNP I    RM+L+ F+RNNR
Sbjct:  880 TFAAALRKFLSKFRLPGEAQCIDRIMESFSKELYRQ------------QGETSF---FKSADAVFVLAFSTIMLNTDLHNPMIKQENRMTLEQFVRNNR 963          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: F0YNK5_AURAN (SEC7 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNK5_AURAN)

HSP 1 Score: 99.8 bits (247), Expect = 3.050e-22
Identity = 57/102 (55.88%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    2 REKTFVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            R + F  ALR FL  F LPGEAQCIDRLME FA +L+ Q               A    PF +ADAAF +AFS IML TDLHNP IA  +RMS DDF+RNNR
Sbjct:  489 RAQPFHVALRNFLSGFHLPGEAQCIDRLMEVFAGELYSQ---------WQSNAGAWAACPFSSADAAFVLAFSTIMLQTDLHNPAIAASKRMSADDFVRNNR 581          
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Match: B7GEP6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GEP6_PHATC)

HSP 1 Score: 98.2 bits (243), Expect = 1.080e-21
Identity = 52/99 (52.53%), Postives = 64/99 (64.65%), Query Frame = 0
Query:    6 FVEALRAFLKEFKLPGEAQCIDRLMEAFARQL-HEQGXXXXXXXXXXXXGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIRNNR 103
            F  ALR FL +F+LPGEAQCIDR MEAF+++L H+QG                    F NADA + +AFS IMLNTDLHNP I + +RM+ D F+RNNR
Sbjct:  875 FALALRKFLSKFRLPGEAQCIDRFMEAFSKELYHQQGASI-----------------FANADAVYVLAFSTIMLNTDLHNPTIKEDKRMTSDQFVRNNR 956          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60897.13630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVF3_ECTSI2.580e-4076.70GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 ... [more]
A0A6H5JJL6_9PHAE2.580e-4076.70SEC7 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CJX6_9STRA4.280e-2758.82Sec7 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S1UXM8_9STRA8.310e-2555.56Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S3PZD4_9STRA5.420e-2457.14Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9YE87_9STRA1.670e-2245.97Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
B8C0S3_THAPS2.200e-2251.96Guanyl nucleotide exchange factor (Fragment) n=1 T... [more]
A0A1Z5K2I7_FISSO2.280e-2253.54SEC7 domain-containing protein n=2 Tax=Fistulifera... [more]
F0YNK5_AURAN3.050e-2255.88SEC7 domain-containing protein n=1 Tax=Aureococcus... [more]
B7GEP6_PHATC1.080e-2152.53Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000904Sec7 domainSMARTSM00222sec7_5coord: 1..103
e-value: 0.0035
score: -26.2
IPR000904Sec7 domainPFAMPF01369Sec7coord: 2..103
e-value: 1.3E-31
score: 109.7
IPR000904Sec7 domainPROSITEPS50190SEC7coord: 1..103
score: 18.218
IPR023394Sec7, C-terminal domain superfamilyGENE3D1.10.1000.11coord: 2..103
e-value: 5.4E-31
score: 108.8
NoneNo IPR availablePANTHERPTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORcoord: 4..103
IPR035999Sec7 domain superfamilySUPERFAMILY48425Sec7 domaincoord: 3..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60897contigH-elongata_contig60897:806..1560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60897.13630.1mRNA_H-elongata_contig60897.13630.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60897 776..1560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60897.13630.1 ID=prot_H-elongata_contig60897.13630.1|Name=mRNA_H-elongata_contig60897.13630.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
MREKTFVEALRAFLKEFKLPGEAQCIDRLMEAFARQLHEQGQGQGQGQGN
EGKGEASRRHPFVNADAAFTMAFSAIMLNTDLHNPQIADHRRMSLDDFIR
NNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000904Sec7_dom
IPR023394Sec7_C_sf
IPR035999Sec7_dom_sf