prot_H-elongata_contig60171.13552.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60171.13552.1
Unique Nameprot_H-elongata_contig60171.13552.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A6G0JS79_9STRA (V-type proton ATPase proteolipid subunit (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0JS79_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.510e-20
Identity = 46/54 (85.19%), Postives = 48/54 (88.89%), Query Frame = 0
Query:    1 MAIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSCES 54
            MAIG+VGDAGVRA+GQQEKLFV MILILIFAEALGLYGLIVALILSQ    C S
Sbjct:   62 MAIGVVGDAGVRAVGQQEKLFVNMILILIFAEALGLYGLIVALILSQKKSDCPS 115          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A7S2WSL7_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSL7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.880e-20
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    2 AIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSCES 54
            AIGIVGD GVRA+G+QEKLFVGMILILIFAEALGLYGLIVALILSQ+ F+C S
Sbjct:  123 AIGIVGDTGVRAVGRQEKLFVGMILILIFAEALGLYGLIVALILSQSGFTCGS 175          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A7S0GWL4_9EUKA (V-type proton ATPase proteolipid subunit n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GWL4_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 1.600e-19
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    1 MAIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSC 52
            MAIGIVGDAGVRA  QQEKLFVGMILILIFAEALGLYGLIVALILSQ+S +C
Sbjct:  112 MAIGIVGDAGVRANAQQEKLFVGMILILIFAEALGLYGLIVALILSQSSENC 163          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A6A3PKY2_9STRA (ATP-synt_C domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3PKY2_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.870e-19
Identity = 43/54 (79.63%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 MAIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSCES 54
            M IG+VGDAGVRA+GQ EKLFV MILILIFAEALGLYGLIV LILSQ    C S
Sbjct:    1 MTIGVVGDAGVRAVGQHEKLFVNMILILIFAEALGLYGLIVGLILSQKKSDCPS 54          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A6G0RDJ1_9STRA (ATP-synt_C domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RDJ1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.950e-19
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MAIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSCE 53
            MAIG+VGDAGVRA+GQ EKLFV MILILIF EALGLYGLIVALILSQ    C 
Sbjct:    1 MAIGVVGDAGVRAVGQHEKLFVNMILILIFTEALGLYGLIVALILSQKKSDCH 53          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A7S3GT47_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT47_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 5.090e-19
Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    7 GDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSC 52
            GDAGVRA+GQQEKLFVGMILILIFAEALGLYGLIVALILSQ SFSC
Sbjct:  124 GDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSFSC 169          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A6A3X4R3_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3X4R3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 6.700e-19
Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 MAIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSCES 54
            MAIG+VGDAGVRA+GQ EKLFV MILILIF EALGLYGLIVALILSQ    C S
Sbjct:   87 MAIGVVGDAGVRAVGQHEKLFVNMILILIFTEALGLYGLIVALILSQKKSDCPS 140          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A6A3GCT7_9STRA (ATP-synt_C domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GCT7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.710e-19
Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    1 MAIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSCES 54
            MAIG+VGDAGVRA+ QQEKLFV M LILIFAEALGLYGLIVALILSQ +  C S
Sbjct:   52 MAIGVVGDAGVRAVNQQEKLFVKMTLILIFAEALGLYGLIVALILSQKTSDCPS 105          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A835YJ26_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ26_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.280e-18
Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    5 IVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSCES 54
            IVGDAGVRA+GQQE+LFVGMILILIFAEAL LYGLIVALILSQ S+SC +
Sbjct:  119 IVGDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCSN 168          
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Match: A0A6A4AY99_9STRA (V-type proton ATPase proteolipid subunit (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AY99_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.080e-18
Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    1 MAIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASFSCES 54
            MAIG+VGDAGVRA+ QQEKLFV M LILIFAEALGLYGLIVALILSQ +  C S
Sbjct:  107 MAIGVVGDAGVRAVSQQEKLFVKMTLILIFAEALGLYGLIVALILSQKTSDCPS 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60171.13552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0JS79_9STRA1.510e-2085.19V-type proton ATPase proteolipid subunit (Fragment... [more]
A0A7S2WSL7_9STRA1.880e-2086.79V-type proton ATPase proteolipid subunit n=1 Tax=E... [more]
A0A7S0GWL4_9EUKA1.600e-1990.38V-type proton ATPase proteolipid subunit n=1 Tax=A... [more]
A0A6A3PKY2_9STRA2.870e-1979.63ATP-synt_C domain-containing protein n=3 Tax=Phyto... [more]
A0A6G0RDJ1_9STRA3.950e-1981.13ATP-synt_C domain-containing protein n=1 Tax=Phyto... [more]
A0A7S3GT47_9STRA5.090e-1995.65V-type proton ATPase proteolipid subunit n=1 Tax=S... [more]
A0A6A3X4R3_9STRA6.700e-1981.48V-type proton ATPase proteolipid subunit n=2 Tax=P... [more]
A0A6A3GCT7_9STRA7.710e-1981.48ATP-synt_C domain-containing protein n=2 Tax=Phyto... [more]
A0A835YJ26_9STRA1.280e-1886.00V-type proton ATPase proteolipid subunit n=1 Tax=T... [more]
A0A6A4AY99_9STRA3.080e-1881.48V-type proton ATPase proteolipid subunit (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 2..45
e-value: 3.2E-16
score: 59.4
NoneNo IPR availableGENE3D1.20.120.610coord: 1..51
e-value: 4.5E-17
score: 64.0
NoneNo IPR availablePANTHERPTHR10263:SF5V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNITcoord: 1..49
NoneNo IPR availablePANTHERPTHR10263V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 1..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..45
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 2..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60171contigH-elongata_contig60171:157..321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60171.13552.1mRNA_H-elongata_contig60171.13552.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60171 130..321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60171.13552.1 ID=prot_H-elongata_contig60171.13552.1|Name=mRNA_H-elongata_contig60171.13552.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MAIGIVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQASF
SCES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002379ATPase_proteolipid_c-like_dom
IPR035921F/V-ATP_Csub_sf