prot_H-elongata_contig59468.13461.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59468.13461.1
Unique Nameprot_H-elongata_contig59468.13461.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: A0A6H5JLR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR6_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 4.590e-27
Identity = 51/78 (65.38%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQEK 78
            DKVGDFSG TPD+LLLETEKALS  +LY PH+ L+++Q+S G+  NEEET++ KLEG+++ELS++E+DVQRY++RQEK
Sbjct:   13 DKVGDFSGFTPDKLLLETEKALSITELYDPHMKLIDLQDSKGETQNEEETMRTKLEGMESELSTLEKDVQRYQERQEK 90          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: D7FUV3_ECTSI (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV3_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.070e-25
Identity = 52/78 (66.67%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQEK 78
            DKVGDFSG TPD+LLLETEKALS  +LY PH+ L+++Q+S GK  NEEET++ KLEG+++ELS++E+DVQRY++RQEK
Sbjct:  168 DKVGDFSGFTPDKLLLETEKALSGTELYDPHMKLIDLQDSKGKSQNEEETMRTKLEGMESELSTLEKDVQRYQERQEK 245          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: A0A6H5JJB3_9PHAE (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJB3_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.400e-25
Identity = 52/78 (66.67%), Postives = 70/78 (89.74%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQEK 78
            DKVGDFSG TPD+LLLETEKALS+ +LY PH+ L+++Q+S GK  NEEET++ KLEG+++ELS++E+DVQRY++RQEK
Sbjct:  171 DKVGDFSGFTPDKLLLETEKALSSTELYDPHMKLVDLQDSKGKSQNEEETMRTKLEGMESELSALEKDVQRYQERQEK 248          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: A0A7S1BUZ0_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUZ0_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 8.270e-10
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQE 77
            DKVG FSG TP ++L ET+KALS EQ+Y  H  L++++E         E++  KL  LK E   +E++ +R E+RQE
Sbjct:  256 DKVGGFSGFTPQQVLKETQKALSGEQMYNVHERLIQLEEELHNSNRTVESVGDKLSSLKAENEQLEREKKRMEERQE 332          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: A0A7S1BU77_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BU77_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 8.940e-10
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQE 77
            DKVG FSG TP ++L ET+KALS EQ+Y  H  L++++E         E++  KL  LK E   +E++ +R E+RQE
Sbjct:  151 DKVGGFSGFTPQQVLKETQKALSGEQMYNVHERLIQLEEELHNSNRTVESVGDKLSSLKAENEQLEREKKRMEERQE 227          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: A0A7S1BVC2_9STRA (Structural maintenance of chromosomes protein 5 n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVC2_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 9.060e-10
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQE 77
            DKVG FSG TP ++L ET+KALS EQ+Y  H  L++++E         E++  KL  LK E   +E++ +R E+RQE
Sbjct:  151 DKVGGFSGFTPQQVLKETQKALSGEQMYNVHERLIQLEEELHNSNRTVESVGDKLSSLKAENEQLEREKKRMEERQE 227          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: C1N4Q2_MICPC (Structural maintenance of chromosomes protein 5 n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N4Q2_MICPC)

HSP 1 Score: 53.5 bits (127), Expect = 2.240e-6
Identity = 28/76 (36.84%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQ 76
            D+V +F+ +TP++LLLETEK +   QL+  H +L+EM++       +  + + ++E LK E +S+E+DV R+ +R+
Sbjct:  186 DRVVEFAKMTPEQLLLETEKTIENGQLHDKHASLIEMKQGIADLERDVSSKRARVEKLKLENASLERDVDRFNERE 261          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: A0A167QVJ2_CALVF (Structural maintenance of chromosomes protein 5 n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167QVJ2_CALVF)

HSP 1 Score: 53.5 bits (127), Expect = 2.240e-6
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQE 77
            D+V +F+ LTP++LL+ET+KA  A  L   H  L+EM ++  K  +E E +K + E L+   S +E+DV R+ +R+E
Sbjct:  258 DRVSEFAQLTPEKLLIETQKAAGAAGLTNWHQQLIEMGQARKKVTDEMEELKGEAEHLEQRNSVLERDVARFRERRE 334          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: M5GFX3_DACPD (Structural maintenance of chromosomes protein 5 n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GFX3_DACPD)

HSP 1 Score: 53.1 bits (126), Expect = 3.060e-6
Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQE 77
            D+V +F+ LTP++LL+ET+KA  A  L R H  L++M +   K   E + +KK  E L+   S +E+DV R+ +R+E
Sbjct:  215 DRVSEFAQLTPEKLLIETQKAAGAAGLTRWHEQLIDMGKDRRKITEETDELKKDAEYLEQRNSVLERDVARFRERRE 291          
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Match: A0A165IP37_9BASI (Structural maintenance of chromosomes protein 5 n=1 Tax=Calocera cornea HHB12733 TaxID=1353952 RepID=A0A165IP37_9BASI)

HSP 1 Score: 51.2 bits (121), Expect = 1.470e-5
Identity = 30/77 (38.96%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    1 DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEETIKKKLEGLKTELSSVEQDVQRYEDRQE 77
            D+V +F+ LTP++LL+ET+KA  A  L   HL L+E  +   K  +E + +K   E L+   S +E+DV R+ +R+E
Sbjct:  255 DRVSEFAQLTPEKLLIETQKAAGAAGLTNWHLQLIEYGQERKKITDEVDELKTDAEHLEQRNSVLERDVARFRERRE 331          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59468.13461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JLR6_9PHAE4.590e-2765.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUV3_ECTSI2.070e-2566.67Structural maintenance of chromosomes protein 5 n=... [more]
A0A6H5JJB3_9PHAE3.400e-2566.67Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S1BUZ0_9STRA8.270e-1044.16Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S1BU77_9STRA8.940e-1044.16Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S1BVC2_9STRA9.060e-1044.16Structural maintenance of chromosomes protein 5 n=... [more]
C1N4Q2_MICPC2.240e-636.84Structural maintenance of chromosomes protein 5 n=... [more]
A0A167QVJ2_CALVF2.240e-640.26Structural maintenance of chromosomes protein 5 n=... [more]
M5GFX3_DACPD3.060e-640.26Structural maintenance of chromosomes protein 5 n=... [more]
A0A165IP37_9BASI1.470e-538.96Structural maintenance of chromosomes protein 5 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..75
IPR027131Structural maintenance of chromosomes protein 5PANTHERPTHR45916FAMILY NOT NAMEDcoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59468contigH-elongata_contig59468:2975..3365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59468.13461.1mRNA_H-elongata_contig59468.13461.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59468 2975..3365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59468.13461.1 ID=prot_H-elongata_contig59468.13461.1|Name=mRNA_H-elongata_contig59468.13461.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
DKVGDFSGLTPDRLLLETEKALSAEQLYRPHLNLMEMQESTGKKINEEET
IKKKLEGLKTELSSVEQDVQRYEDRQEKKKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027131SMC5