prot_H-elongata_contig59304.13444.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59304.13444.1
Unique Nameprot_H-elongata_contig59304.13444.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A6H5KCB3_9PHAE (zf-Tim10_DDP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCB3_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 2.370e-25
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            MS LCFKKCVVKM GESDL+VGEM+CVDRCVSKY+EAQEK+GVILK AEE++AAQQ
Sbjct:   35 MSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLAAQQ 90          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A7S2HYG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYG5_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.640e-16
Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            M++ CF+KC  K   +SDL++GEM+C DRCV+KY+EAQEKIGVI+++A E  AAQQ
Sbjct:   80 MASSCFQKCASKKHKDSDLALGEMSCTDRCVAKYLEAQEKIGVIIQKANEAQAAQQ 135          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A6U1NEZ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NEZ7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.220e-15
Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            M+ +CFKKC      E++L+VGEM+CVDRC  KYIEA +K+G +LK  EE M AQQ
Sbjct:   34 MATICFKKCAASKIKEAELNVGEMSCVDRCTGKYIEAHQKVGEVLKRVEEQMKAQQ 89          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: K0R6N2_THAOC (zf-Tim10_DDP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6N2_THAOC)

HSP 1 Score: 69.7 bits (169), Expect = 2.290e-14
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            M+  CF KC  +   E+DL++GEM+C DRCV+KYIEAQEK+GVIL++A E    QQ
Sbjct:   11 MAASCFNKCASRKHKENDLALGEMSCADRCVAKYIEAQEKVGVILQKANEAQMKQQ 66          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A448YV82_9STRA (zf-Tim10_DDP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV82_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 5.400e-14
Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQ 55
            +++ CF KC  +   E DLS+GEMTC DRCVSKY+E QE+IGV+L++A E  A Q
Sbjct:   35 IASTCFSKCASRKHKEPDLSLGEMTCADRCVSKYLEGQERIGVVLQKANEEQAQQ 89          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A7S0GCN6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCN6_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.540e-13
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            MS  CF+KC      + +L++GEM CVDRCV+KY+E QEK+G++L++A E  AAQQ
Sbjct:   33 MSASCFEKCASTRHKDDELALGEMGCVDRCVAKYLETQEKVGIVLQKANEAQAAQQ 88          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A6U0JD31_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JD31_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.540e-13
Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            +S  CF+KC  +   + DL++GEM C DRCVSKY+EA EK+GV+L++A E  A QQ
Sbjct:   34 ISGTCFEKCASRRHRDGDLALGEMACTDRCVSKYMEAMEKVGVVLQKANEQQAQQQ 89          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A482SMP3_9ARCH (Tim10/DDP family zinc finger protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMP3_9ARCH)

HSP 1 Score: 67.0 bits (162), Expect = 2.120e-13
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            MS  CFKKCV     + +LSVGEMTCVDRCV KYIEAQEK+G +L   E+ M  Q+
Sbjct:    1 MSQGCFKKCVASYH-DGELSVGEMTCVDRCVGKYIEAQEKVGDVLNNFEKLMKQQE 55          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A1E7FWV3_9STRA (Mitochondrial import inner membrane translocase subunit tim10 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWV3_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.130e-13
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    5 CFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            CF+KC  +   E DLS+GEMTC DRCVSKY+E Q+ IGV+L++A E  A QQ
Sbjct:   40 CFQKCASRKHKEPDLSLGEMTCTDRCVSKYLEGQQLIGVVLQKANEQQAQQQ 91          
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Match: A0A6T5YYM4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5YYM4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 6.080e-13
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    5 CFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEETMAAQQ 56
            CF+KC      E D+S+GEM+C DRCV+KY+E+QE++G IL++A E+ AAQQ
Sbjct:   38 CFQKCASTRHREPDISLGEMSCTDRCVAKYLESQERVGKILQKANESQAAQQ 89          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59304.13444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCB3_9PHAE2.370e-2583.93zf-Tim10_DDP domain-containing protein n=2 Tax=Ect... [more]
A0A7S2HYG5_9STRA8.640e-1660.71Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6U1NEZ7_9STRA4.220e-1557.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K0R6N2_THAOC2.290e-1457.14zf-Tim10_DDP domain-containing protein n=1 Tax=Tha... [more]
A0A448YV82_9STRA5.400e-1456.36zf-Tim10_DDP domain-containing protein n=1 Tax=Pse... [more]
A0A7S0GCN6_9STRA1.540e-1353.57Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6U0JD31_9STRA1.540e-1353.57Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A482SMP3_9ARCH2.120e-1360.71Tim10/DDP family zinc finger protein n=1 Tax=archa... [more]
A0A1E7FWV3_9STRA2.130e-1359.62Mitochondrial import inner membrane translocase su... [more]
A0A6T5YYM4_9STRA6.080e-1355.77Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810coord: 1..56
e-value: 3.7E-17
score: 63.6
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 1..48
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 1..42
e-value: 1.2E-12
score: 47.3
NoneNo IPR availablePANTHERPTHR11038MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59304contigH-elongata_contig59304:1941..2599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59304.13444.1mRNA_H-elongata_contig59304.13444.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59304 1941..2617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59304.13444.1 ID=prot_H-elongata_contig59304.13444.1|Name=mRNA_H-elongata_contig59304.13444.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
MSNLCFKKCVVKMSGESDLSVGEMTCVDRCVSKYIEAQEKIGVILKEAEE
TMAAQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035427Tim10-like_dom_sf
IPR004217Tim10-like