prot_H-elongata_contig58978.13401.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58978.13401.1
Unique Nameprot_H-elongata_contig58978.13401.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length274
Homology
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: D7G0V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V4_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 2.640e-105
Identity = 189/303 (62.38%), Postives = 219/303 (72.28%), Query Frame = 0
Query:    9 STQDIRPSPTPSEELQRVMLSLPRGDWPEIFHTLNSVRRLATHHAPLLLSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIALADIWRGFRDSVDPELPMVCPVLVKKMADKVEFLAEAARECVDEVVATASNTRALSAFLACGNHRSPVVRAKSALAILLCVRRRCADVGGRTT-------------------------GPGH---MGPREIDRVLTIVSKFLQ---------ASDGNQETRLHAKSLVALLLDAGEVDRARLHQELPPPILERLQRDLFNSSLPCGLGFTS 274
            + +DIRPSP PS+ELQR M SLPR  WPEIFHTLNSVRRLATHH PLL  SQS+LHALVRDVLGQ ENLRSQ            VAKN+L+ LAD+WRG  D++DPELPMVCP+LVKKMADKV+FLAEAARECVDEVVATA+ +RALSAFLACG+HRSP VRAKSALA+LLCVRRRC     RT                          G GH   MG RE+DR+L+ + +FLQ         + DGNQETR HAK++V +L++ GEV  ARL +E+PPPILERLQR+L NSSLP G GFT+
Sbjct: 1529 TAEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHTPLL-GSQSHLHALVRDVLGQSENLRSQ------------VAKNALLTLADLWRGLGDTLDPELPMVCPILVKKMADKVDFLAEAARECVDEVVATATESRALSAFLACGSHRSPAVRAKSALAVLLCVRRRCCHPTSRTAPSPLSGAASSRRSGVRIDKRNGGGGGAGHAGRMGAREMDRLLSALPRFLQRGIVLRGSVSMDGNQETRHHAKAVVTVLMNTGEVGEARLRREIPPPILERLQRELLNSSLPSGPGFTA 1818          
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: A0A6H5L523_9PHAE (CLASP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L523_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 2.020e-92
Identity = 174/294 (59.18%), Postives = 199/294 (67.69%), Query Frame = 0
Query:    9 STQDIRPSPTPSEELQRVMLSLPRGDWPEIFHTLNSVRRLATHHAPLLLSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIALADIWRGFRDSVDPELPMVCPVLVKKMADKVEFLAEAARECVDEVVATASNTRALSAFLACGNHRSPVVRAKSALAILLCVRRRCADVGGRTT-------------------------GPGH---MGPREIDRVLTIVSKFLQASDGNQETRLHAKSLVALLLDAGEVDRARLHQELPPPILERLQRDLFNSSLPCGLGFTS 274
            + +DIRPSP PS+E+QR M SLPR  WPEIFHTLNSVRRLATHH+PLL  SQS+LHALVRDVLGQ ENLRSQ            VAKN+L+ LAD+WRG  D++DPELPMVCP+LVKKMADKVEFLAEAARECVDEVVATA+ +RALSAFL CG+HRSP VRAKSALA+LLCVRRR       T                          G GH   MG RE+DR+L+ + +FLQ                      GEVD ARL +E+PPPILERLQR+L N SLP G GFT+
Sbjct: 1535 TAEDIRPSPNPSQEMQRAMASLPRDGWPEIFHTLNSVRRLATHHSPLL-GSQSHLHALVRDVLGQSENLRSQ------------VAKNALLTLADLWRGLGDTLDPELPMVCPILVKKMADKVEFLAEAARECVDEVVATATESRALSAFLTCGSHRSPAVRAKSALAVLLCVRRRYCHPTSETAPLQLSGAASSRRSGVRIDKRNGGGGGAGHAGSMGAREMDRLLSALPRFLQ----------------------GEVDEARLRREIPPPILERLQRELLNFSLPSGPGFTA 1793          
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: A0A7S3YBP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBP5_HETAK)

HSP 1 Score: 178 bits (452), Expect = 1.570e-51
Identity = 104/261 (39.85%), Postives = 151/261 (57.85%), Query Frame = 0
Query:   10 TQDIRPSPTPSEELQRVMLSLPRGDWPEIFHTLNSVRRLATHHAPLLLSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIALADIWRGFRDSVDPELPMVCPVLVKKMADKVEFLAEAARECVDEVVATASNTRALSAFLACGNHRSPVVRAKSALAILLCVRRRCADVGGRTTGPGHMGPREIDRVLTIVSKFLQASDGNQETRLHAKSLVALLLDAGEVDRARLHQELPPPILERLQRDLFNSSLPCGL 270
            T DIRPSP PS ELQR + +LP G+WPE+FHTLN+VRRL  HH  LL   + +LH +VRDVL Q ENLRS             V KN+++ LAD+WRG   + DPEL +V PVL+K++A+   FL + A E +  +V  A+  RAL AF+ C   ++P +RA++A+ +   V+R    +G R         +E+ ++L  +  FLQ  D N +TR + + L+  LL AG      L + +P  +L++     F +    GL
Sbjct:   13 TDDIRPSPNPSHELQRTLRALPNGEWPEVFHTLNAVRRLGLHHGALL---EPHLHGVVRDVLKQSENLRSA------------VKKNAILTLADLWRGLGPTCDPELALVAPVLIKRVAESNGFLIDTAEEAIATIVDRATPRRALEAFICCSRSKNPQIRAETAIVVYKLVQR----MGNRL----RPNSKEVAKILEEMPLFLQ--DANPKTRTYGRHLLHHLLGAGLATEEELGRAVPAHVLKKALASTFAAGGHVGL 248          
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: A0A835ZHW3_9STRA (TOG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW3_9STRA)

HSP 1 Score: 155 bits (392), Expect = 4.170e-39
Identity = 107/280 (38.21%), Postives = 137/280 (48.93%), Query Frame = 0
Query:   12 DIRPSPTPSEELQRVMLSLPRGDWPEIFHTLNSVRRLATHHAPLL-----------LSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATH-----------------------------VAKNSLIALADIWRGFRDSVDPELPMVCPVLVKKMADKVEFLAEAARECVDEV---------------VATASNTRALSAFLACGNHRSPVVRAKSALAILLCVRRRCADVGGRTTGPGHMGPREIDRVLTIVSKFLQASDGNQETRLHAKSLVALLLD 236
            D+RPSP    EL R + SL R DWPEIFHTLN+ RRLA HHAPL+           L    NL +                     C  +T                              VAKN+L+ L D+W+G   ++DPELP+V PVL+KK  DKV+FL +AA   V++V               VA A++ RALSAFL C   R+  +RAK+A  +L CVRR    VG R +       RE +RVL  +  FLQ  DG+QETR H K+L   LL+
Sbjct: 1251 DLRPSPNAKAELARALASLARDDWPEIFHTLNAARRLARHHAPLVEAHARELTRDVLRHVDNLRSQXXXXXXXXXXXXXXXXXXXXCSISTSISDVPLVSRXXXXXXXXXXXXXXXXXXXXVAKNALLTLGDLWKGLGRALDPELPLVAPVLIKKYTDKVDFLRQAAEGAVEDVXXXXXXXXXXXXXXXVANATDVRALSAFLGCSAARAAPLRAKAAATVLKCVRR----VGARLSAC-----REAERVLQALPLFLQ--DGHQETRAHGKALTRYLLE 1519          
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: A0A4D9CTV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTV7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.490e-22
Identity = 77/246 (31.30%), Postives = 121/246 (49.19%), Query Frame = 0
Query:   13 IRPSPTPSEELQRVMLSLPRGDWPEIFHTLNSVRRLATHHAPLLLS-SQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIALADIW-------------RGFRDSVDPEL-----PMVCPVLVKKMADKVEFLAEAARECVDEVVA-TASNTRALSAFLACGNHRSPVVRAKSALAILLCVRRRCADVG--GRTTGPGHMGP--REIDRVLTIVSKFLQASDGNQETRLHAKSLVALL 234
            +RP P P++ L  ++ SLP  DWPE FH+L ++RRLA HH  +L + S  +L  L+ ++   ++NLRS             VAKN+L+ LADIW             +G  + +DP L     P++ P L+++  D   FLA+ A    + V+  T    R LSA L    H+ P+ R + A  +  C+ R  A        TG G +GP  + + R        + A+DG++  ++   +L A L
Sbjct:  481 LRPLPDPNQSLTHLVTSLPTADWPENFHSLTTIRRLALHHPDILFALSPPSLRLLLVELFRLIDNLRSA------------VAKNALLTLADIWSHAGRAPKPKHSEKGSVEGIDPRLLENALPILVPPLLRRCCDTSGFLAQTAEAAFEAVIHHTPDMARLLSALLPMAAHKHPLARRRVATVVRQCLSRLAATSSFVSPVTGAGSVGPLTKRMHRKKRA-GNAIAAADGSKNKQVGCDTLSAEL 713          
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: A0A8K1C562_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C562_PYTOL)

HSP 1 Score: 95.5 bits (236), Expect = 1.970e-18
Identity = 66/248 (26.61%), Postives = 122/248 (49.19%), Query Frame = 0
Query:   12 DIRPSPTPSEELQRVMLSLPRGDWPEIFHTLNSVRRLATHHAPLLLSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIALADIWRGFRDSVDPELPMVCPVLVKKMADKVEFLAEAARECVDEVVATASNTRALSAFLACGNHRSPVVRAKSALAILLCVRRRCADVGGRTTGPGHMGPREIDRVLTIVSKFLQASDGNQETRLHAKSLVALLLDAGEVDRARLHQELPPPILERLQR 259
            +++P P   ++  +++ +L   DW  +F  LN VRRLA HH   L   + NLHA+V++++ QV NLRS             V+KN+L+AL  +   +   +D ++  +  +L+K+  D   F+ E+A   ++ V+   S +R +SA       R+  +R + A AI   +          + G      +E+  ++++V K L+  D + + R  AK  +  LL    +D  R+ + LP  +  R+ +
Sbjct:  887 ELKPLPNAKQDAAKIVQTLQNEDWEVVFEGLNLVRRLAAHHTKFL---EENLHAVVKEIVAQVPNLRSS------------VSKNALLALESMCAAYGKLLDADVDRILAILLKRCTDSNTFVCESASTAINAVITHCSTSRVVSAVSTHITSRANPIRREVARAIHHVIL---------SLGDQIQQSKELGMIMSLVGKCLE--DSSNDVRDVAKLSIGCLLADLRMDSERVKKLLPSALHPRVDQ 1108          
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: A0A7J7PZF7_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PZF7_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 2.690e-12
Identity = 79/262 (30.15%), Postives = 120/262 (45.80%), Query Frame = 0
Query:   12 DIRPSPTPSEELQRVMLSLPRG--------DWPEIFHTLNSVRRLATHHAPLLLSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIALADIWRGFRDSVDPELPMVCPVLVKKM-----ADKVEFLAEAARECVDEVVATASNTRALSAFLACG-NHRSPVVRAKSALAILLCVRRRCADVGGRTTGPGHMGPREIDRVLTIVSKFLQASDGNQETRLHAKSLVALLLDAGEVDRARLHQELPPPILERLQR 259
            ++ P P P   L+ V+    +         DW      L   RRLA HHA +++++    H LV  VL  V+ LRS              A+ +L  L ++      S+D EL  + PVL+KK      A +  FLA  A + +  +++T S  RALS  LACG +H+SP VR ++A A L  V      + G   G        +DR+    + FLQ  +G+ +TR H K L+  +  A    R+ L + +     + LQR
Sbjct:  699 ELAPLPDPEGTLRHVIAKCQQSNAAARKELDWQGQLEALMDARRLAAHHAEVVMAAS---HELVLAVLPAVDELRSTT------------ARVALQLLQELPAVLGRSLDRELEDIVPVLLKKAGELSTAGRDNFLAAEADKALSAILSTVSEARALSTLLACGMSHKSPHVRCRAA-AHLDEVAAGGQGLEGLLRGNSWS---LLDRLFKAAAAFLQ--EGSLDTRTHGKRLLWAVKAALHGSRSELDRLVTGVGADALQR 939          
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: H3HAM4_PHYRM (TOG domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAM4_PHYRM)

HSP 1 Score: 71.6 bits (174), Expect = 2.180e-10
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0
Query:   12 DIRPSPTPSEELQRVMLSLPRGDWPEIFHTLNSVRRLATHHAPLLLSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIALADIWRGFRDSVDPELPMVCPVLVKK 126
            +I P   P ++L +++  L   DW   F  +N+VRRLA HHA ++    S +H +V ++L QV NLRS             V+KN+L+AL  +   F  ++D E+  + PVL+K+
Sbjct:  492 EITPLMNPKQDLSKILTQLRSEDWEANFDAMNTVRRLAIHHAGMI--DLSKVHGIVAEILKQVPNLRSS------------VSKNALLALESMCSAFSRAMDSEVENIIPVLLKR 592          
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Match: A0A2P6V0D7_9CHLO (Uncharacterized protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0D7_9CHLO)

HSP 1 Score: 63.9 bits (154), Expect = 9.030e-8
Identity = 53/188 (28.19%), Postives = 88/188 (46.81%), Query Frame = 0
Query:   34 DWPEIFHTLNSVRRLATHHAPLLLSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIALADIWRGFRDSVDPELPMVCPVLVKK-----MADKVEFLAEAARECVDEVVATASNTRALSAFLACGNHRSPVVRAKSALAILLCVR----RRCADVGGRTTGPGHMGPREIDRVLTIVSK 212
            DW   F  L +VRRLA HHA LL+   + LHALV  V   V+ LRS             +++ ++     +      ++D EL    P+L+K+     ++ +  FLA  A   +  VV    + R   + L C + +SP VRAK+A+ +  C++    R    +GG     G + PR +   + ++ +
Sbjct: 1205 DWQAQFEGLRNVRRLALHHAGLLIVPLT-LHALVALVAPVVDALRST------------LSRLAIAVFQSLAEALGPALDAELDAFVPLLLKRAGQISVSGRDNFLAVEADRALSAVVERCGDVRPAISLLNCLSSKSPDVRAKAAMHLDACLQLHGPRLVGGLGGTGGXXGSLLPRLLHAAVALLEE 1379          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58978.13401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G0V4_ECTSI2.640e-10562.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L523_9PHAE2.020e-9259.18CLASP_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3YBP5_HETAK1.570e-5139.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835ZHW3_9STRA4.170e-3938.21TOG domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9CTV7_9STRA3.490e-2231.30Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8K1C562_PYTOL1.970e-1826.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7J7PZF7_9CHLO2.690e-1230.15Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
H3HAM4_PHYRM2.180e-1034.78TOG domain-containing protein n=1 Tax=Phytophthora... [more]
A0A2P6V0D7_9CHLO9.030e-828.19Uncharacterized protein n=1 Tax=Micractinium condu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 7..261
e-value: 4.1E-26
score: 94.0
NoneNo IPR availablePANTHERPTHR21567CLASPcoord: 22..242
NoneNo IPR availablePANTHERPTHR21567:SF62CRESCERIN-LIKE PROTEIN CHE-12coord: 22..242
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 92..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58978contigH-elongata_contig58978:818..3299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58978.13401.1mRNA_H-elongata_contig58978.13401.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58978 818..3299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58978.13401.1 ID=prot_H-elongata_contig58978.13401.1|Name=mRNA_H-elongata_contig58978.13401.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
MHRAVTPCSTQDIRPSPTPSEELQRVMLSLPRGDWPEIFHTLNSVRRLAT
HHAPLLLSSQSNLHALVRDVLGQVENLRSQARAHGCCLRATHVAKNSLIA
LADIWRGFRDSVDPELPMVCPVLVKKMADKVEFLAEAARECVDEVVATAS
NTRALSAFLACGNHRSPVVRAKSALAILLCVRRRCADVGGRTTGPGHMGP
REIDRVLTIVSKFLQASDGNQETRLHAKSLVALLLDAGEVDRARLHQELP
PPILERLQRDLFNSSLPCGLGFTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold