prot_H-elongata_contig57805.13250.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57805.13250.1
Unique Nameprot_H-elongata_contig57805.13250.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length199
Homology
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BLAST of mRNA_H-elongata_contig57805.13250.1 vs. uniprot
Match: D8LNJ8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ8_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 5.040e-5
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:    4 MIYLINQSCAHDGCFKRPSYGLPGSRKAEFCSQHKRGG 41
            MI ++++ CAH GC K PSYG+P S+KAEFC+ H R G
Sbjct:    1 MIDVVSKRCAHSGCNKWPSYGMPPSKKAEFCANHARPG 38
[Close]
BLAST of mRNA_H-elongata_contig57805.13250.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 8.410e-5
Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    3 GMIYLIN-QSCAHDGCFKRPSYGLPGSRKAEFCSQH 37
            GM+ + N + CAH+ C K P+YG+PG+RKAEFC+ H
Sbjct:    7 GMVDIHNIRRCAHEDCVKHPTYGVPGTRKAEFCAPH 42
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57805.13250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNJ8_ECTSI5.040e-557.89EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5LBM3_9PHAE8.410e-555.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57805contigH-elongata_contig57805:1619..2896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57805.13250.1mRNA_H-elongata_contig57805.13250.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57805 1619..2923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57805.13250.1 ID=prot_H-elongata_contig57805.13250.1|Name=mRNA_H-elongata_contig57805.13250.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MVGMIYLINQSCAHDGCFKRPSYGLPGSRKAEFCSQHKRGGMIDLRTKKC
LYDGCCIQPSYGLPGTRKVEYCSQHKTEGMVDIRTKKCLHDACTTQPSYG
LPGSKKPEFCSQHKKSGMIDIQSRTCMHNGCSKSPSYGVPGSKKAELCFE
HKIVGMLNIRSKTCAHGGCPTQPSYGSPGSKKVEFCSQHKKEGMINLKK
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