prot_H-elongata_contig57742.13244.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57742.13244.1
Unique Nameprot_H-elongata_contig57742.13244.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 84.0 bits (206), Expect = 1.240e-16
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    8 EWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            EW KA E E+    +  ++++V RP+D  ++G+K ++K K G DG+VEKYK RLVA+GF QVE + Y E ++P   + SIR+LL  A   D E+   +
Sbjct: 1009 EWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMD 1106          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 78.2 bits (191), Expect = 4.280e-16
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 0
Query:    3 SPEWGEWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            SP+  +W  A E E+  + +N  +  V RP+   VV  K ++KRK+ +DG+VE+YK RLVA+G+ QVE + Y E +SP   T SIR LL  +V +D ++    
Sbjct:   40 SPDAEKWKLAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIRTLLAFSVEQDWQVHQLG 142          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 81.3 bits (199), Expect = 1.080e-15
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 0
Query:    1 MESPEWGEWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            M  P+   W  A   E+H   K  LY +V RP+D  VV  K ++K K G DG+++KYK RLVAKGF QVE + + E ++P    AS+R LL  A   D E+   +
Sbjct:  631 MARPDTVHWKAAMAEELHAFAKAELYDEVERPRDRKVVDCKWVFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVRTLLALAAKLDLEIHQMD 735          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 80.9 bits (198), Expect = 1.490e-15
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0
Query:    8 EWWKAE-ETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            E WKA    E+    K  LY +V RP++  VVG K ++K K G DG++EKYK RLVAKGF QVE+V Y E ++PT   ++IR LL  A   D E+   +
Sbjct:  962 ECWKAACAEELLSFTKAELYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMD 1060          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 80.9 bits (198), Expect = 1.500e-15
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 MESPEWGEWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            M  P+   W  A   E+H  VK  LY +V RP++  V+  K ++K K G DG++EKYK RLVAKGF QVE + + E ++P    AS+R LL  A   D E+   +
Sbjct:  933 MSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMD 1037          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A4Z0AA04_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0AA04_9AGAM)

HSP 1 Score: 80.5 bits (197), Expect = 1.950e-15
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 MESPEWGEWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            M  P+  EW  A   E+H   +  +Y++V RP+D  VV +K +++ K G +G+VEKYK RLVAKGF QVE + + E ++P     S+RMLL  A  +D E+   +
Sbjct:  373 MSRPDAAEWLAACNEELHSFKQMGVYEEVDRPRDCKVVNSKWVFRIKRGPNGEVEKYKARLVAKGFTQVEGIDFDETFTPVVKFTSLRMLLALATKEDLEVHQMD 477          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 80.5 bits (197), Expect = 1.980e-15
Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 MESPEWGEWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            M  P+   W  A   E+   VK  LY +V RP+D  VVG K +++ K G DG++EKYK R+VAKGF QVE V Y + ++P    ASIR LL  A   D E+   +
Sbjct:  289 MSRPDAERWKAACAEELLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMD 393          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A401H317_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H317_9APHY)

HSP 1 Score: 80.5 bits (197), Expect = 2.010e-15
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 MESPEWGEWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            M  P+   W  A   E+H  VK  LY +V RP++  V+  K ++K K G DG++EKYK RLVAKGF QVE + + E ++P    AS+R LL  A   D E+   +
Sbjct:  874 MSRPDAARWKAACAEELHAFVKAELYDEVERPQNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMD 978          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 80.1 bits (196), Expect = 2.750e-15
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 MESPEWGEWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGELRHFN 105
            M  P+   W  A   E+H  VK  LY +V RP++  V+  K ++K K G DG++EKYK RLVAKGF QVE + + E ++P    AS+R LL  A   D E+   +
Sbjct:  610 MSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMD 714          
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Match: A0A5N6MV24_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MV24_9ASTR)

HSP 1 Score: 79.3 bits (194), Expect = 5.090e-15
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    8 EWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQDGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGEL 101
            EWW+A E EM  M +N  ++ V +P D  VV  K +YK K   DG VE++K RLVA+GF Q   V Y E +SP     ++R+LL  AV K  EL
Sbjct:  475 EWWQAMEEEMTAMYRNKTWELVPKPTDAKVVSCKWVYKLKQKPDGSVERFKARLVARGFSQEYGVNYEETFSPVAKLTTVRVLLAVAVSKQWEL 568          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57742.13244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK1.240e-1642.86Integrase catalytic domain-containing protein (Fra... [more]
UPI0015A81C6A4.280e-1640.78uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A8H7NTQ9_9APHY1.080e-1541.90Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9XTU1_9APHY1.490e-1546.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A401G4V0_9APHY1.500e-1541.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Z0AA04_9AGAM1.950e-1540.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1C7MSU6_GRIFR1.980e-1543.81Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H317_9APHY2.010e-1541.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H123_9APHY2.750e-1541.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N6MV24_9ASTR5.090e-1545.74Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 26..100
e-value: 6.0E-13
score: 49.0
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..104
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 5..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57742contigH-elongata_contig57742:1222..1542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57742.13244.1mRNA_H-elongata_contig57742.13244.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57742 1222..1542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57742.13244.1 ID=prot_H-elongata_contig57742.13244.1|Name=mRNA_H-elongata_contig57742.13244.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MESPEWGEWWKAEETEMHGMVKNCLYKQVARPKDNLVVGTKILYKRKVGQ
DGKVEKYKCRLVAKGFWQVENVQYAEKYSPTPATASIRMLLVTAVVKDGE
LRHFNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like